| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_2480 |
|---|
| Symbol | |
|---|
| ID | 7303269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 2561841 |
|---|
| End bp | 2564909 |
|---|
| Gene Length | 3069 bp |
|---|
| Protein Length | 1022 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643600206 |
|---|
| Product | peptidase C14 caspase catalytic subunit p20 |
|---|
| Protein accession | YP_002497753 |
|---|
| Protein GI | 220922451 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAAA CACATGCATT GCTGCTTGCC TTGGGGCTCA TTGGCCAATC GAGCTCGACA
GCTCTTGCGT TAGATGCGGC CGGCTACAAT ACTCGCGGGT ACAGCTTTCA GAACAAGGGT
GAGTACGATC GGGCGATCGC CGACTACAAT CAAGCCTTAC GGCTCGACCC CAAATTGACC
GCCGCTTACG TCAATCGTGG GTTCACCTTC CGAAGCAAGG GTGAGTACGA TCGGGCGATC
GCCGACTACA ATCAAGCCTT ACGGCTCGAC CCCAGGTCTG TAATCGCTTA CAATAATCGC
GGCGACGCCT TCTACCACAA AGGCGACTAT GAGCGAGCGA TCGCAGATTA TAACCGAGCT
TTACAGTTGG ACCCCAAGCA TCCGATCGTC TACAACAATC GCGGGTTCGC CTTTCACGGC
AAAGGAGAGT ACGACAGAGC AATTGCAGAC TACAATCAAG CCCTGCAGCT TGATCCTAAT
TACACATTTG CATACAATAA TCGCGGATTT GCATTTCAGG GCAAGGGTGA ATACGATCGA
GCTATTGCAG ACTACAGCCA AGCCCTGCGT CTCGACCCCA AATACGCAAT CGCCTACACC
AATCGTGGGG ACGTTTTTCG GAGCAAAGGT GAGTACAACC GGGCGATCGC CGACTATAAT
CAAGCCCTAC AGTTCGATCC TAAGCCCATA ATCGCTTACA ACAATCGCGG TCTCGCCTTT
CAGAATATGG GCGAATACGA TCGAGCAATT TCGGATTACA CTGAAGCCTT ACGGCTCGAA
CCTAAATACG TGATTGCCGT TGTCAATCGT GCAGATGCCT TTCGGATCAA GGGTGAGTAC
GATCGCGCAA TAGTTGACTA CGACCAAGCC CTCCATCTTA ACCCAAATTA CGCTATAGCC
TACAACAATC GAGGATTGGC CTTTCAGAAC AAGGGTGAAT ACGATCGAGC TATTGCAGAC
TACAGCCAAG CCCTGCGTCT CGATCCCAAA TACGTAATCG CCTTTGTCAA TCGCGGGGAC
GCCTTTCGAA ACAAAGGTGA AAATGACGTC GCGATCGCTG ACTACAATCA AGCCCTCCGT
CTAAATCCAA GTTACAGTAC TGCCTACAAC ACTCGCGGGC TGGCTTTTCA GAACAAGGGC
GAGTACGATC GAGCGATTGC AGATTATGAA CAGGCCATCC GGCTCGATCC CAAGTCGGCG
ATCGCCTACA ACAATCGTGG GTTCGCCCTC CAAAGCAAAG GTGAGTACGA TAGAGCAATC
ACAGACTACA ATCAAGCCTT ACAGCTCAAT CCCAAGTCCG CGATAACCTA CACCAATCGC
GGGTTCGTCT TCCAGAGCAA GGGTGAATAC GATCGAGCAA TTGCAGACTA TGATCTCGCC
TTGCAGTTCG ATCCAAAGTA CGCGATCGCC TACACCAATC GTGGGGATGT TTTTCGGAGC
AAAGGTGAGT ACGATCGAGC AATTGCAAAC TATGATCAAG CCATCCAGCT CAATCCAAAA
TACGTAGTAG CTTACAACAA TCGTGGGCTA GCCCTCCAAA ATAAGGGTGA GCCCGACCGG
GCGATTGCAA ATTACGACCA AGCCCTTCAG CTTAATCCCA GATACATAGT CGCCTACATC
AATCGTGGGG ATGCCTTTCG CAGCAAAGGT GAGTGCGATC GGGCGGTCTC CGATTATAAT
CAAGGTCTCG AACTTGACCA CAATAACGTG CTTGCCTACA ACAATCGTGG ACTATGCTTC
CAAAACAGAG GGGAGTACGA CCTGGCAATC GCAGATTACG ATCATGCCCT GCAGATTGAC
CCCAAGTACG CAACCGCCTT TGTCAATCGG GGATTTGCGT TCCAGAAGAA GAGTGAATAC
GATCGGGCAA TCGCAGATTA TGATCGCGCC TTGCAACTCG ATCCCAAATC TGCAGTCGCC
TACAACAATC GCGGGTTCGC CTTCCAAAGC AAGGGTGCGT ATGACCTCGC AATTGCGGAT
TACGATCATG CGTTGCTGCT TAAACCTGGG TTAGCAAACG CATATTATCA TCGTGGAACG
GTTTTCAGCT TTAAAGGCAA CCTTGATCAC AGTATCTCTG ATTTGAGTGA GGCCATACGG
CTTAATCCCA AGTACGCCGA GGCTTATCAA GATCGGGGCA TCACGTACCA GGCCAGAGGG
GAACCGGACC GGGCTCTTGC AGATTTCGCT GAGGCTGCAC GGCTGAAGCC TGAGCTTGAG
GACGATGCAG CCTTTCTCAC GGCCCGCCGC GAGGCGCAGG CAGCTCAAAC TAGCCGGACC
GCAGCCGCCG TAGTTGTTAC AGCCGTCCAG ACCTCGCCGG TCGTGTCTCC GCCCACGATG
TCGGTCATCA CACCACTTTC CGAGAGGCGG GTCGCGCTGG TGATTGGCAA CGGTGCGTAT
ACCTCCGTCG CCGCACTCGA CAATCCGACG CGAGACGCCA GCGCTATCGC GCGCTCTTTG
CGTCAAGCTG GCTTCAAGAG CGTTCGTTTG GAAAATGACC TCCGCTATGA TGATCTGCGG
CGAGCTCTGA ACAGCTTCTC GGCCGAGGCT GACCAGGCTG ATTGGGCCGT GGTCTATTAC
GCTGGGCACG GCATTGAAGT CGGGGGCACT AACTACCTTG TGCCTGTCGA TGCCCAGCTG
AAGACGGACC GGGCCGTGCA GTTCGAAGCG GTTCCACTTG ATCAAGTGCT GGGCAGCATC
GAAGGCGCAC GTAAGCTCCG TCTTGTGATC TTGGATGCCT GTCGTGACAA TCCGTTCCTG
CAGCAGATGA CGCGCACAGT TTCGTCACGA TCAGTGGGGC GCGGCTTGGC GAAGATCGAG
CCAGAGACAA GTGGCACACT GGTGGCTTTT GCAGCCAAGC ACGGCCAAGT TGCACTAGAT
GTGCAGGATG GTCAGGCAAA TAGCCCTTTC GCAACGGCCT TGATCAAGAA CATTGCAAAA
CCTGACACTG AGATCCGAAA GATGTTTGGG TTAGTACACG ATGATGTCAT GGCAAGCACA
GGTCGCAAGC AGGAGCCTTT CGTTTATGGT GCCCTCGGAG GTGAGGATTA CTTTTTCAGT
ATGCGCTAA
|
|---|
| Protein sequence | MRKTHALLLA LGLIGQSSST ALALDAAGYN TRGYSFQNKG EYDRAIADYN QALRLDPKLT
AAYVNRGFTF RSKGEYDRAI ADYNQALRLD PRSVIAYNNR GDAFYHKGDY ERAIADYNRA
LQLDPKHPIV YNNRGFAFHG KGEYDRAIAD YNQALQLDPN YTFAYNNRGF AFQGKGEYDR
AIADYSQALR LDPKYAIAYT NRGDVFRSKG EYNRAIADYN QALQFDPKPI IAYNNRGLAF
QNMGEYDRAI SDYTEALRLE PKYVIAVVNR ADAFRIKGEY DRAIVDYDQA LHLNPNYAIA
YNNRGLAFQN KGEYDRAIAD YSQALRLDPK YVIAFVNRGD AFRNKGENDV AIADYNQALR
LNPSYSTAYN TRGLAFQNKG EYDRAIADYE QAIRLDPKSA IAYNNRGFAL QSKGEYDRAI
TDYNQALQLN PKSAITYTNR GFVFQSKGEY DRAIADYDLA LQFDPKYAIA YTNRGDVFRS
KGEYDRAIAN YDQAIQLNPK YVVAYNNRGL ALQNKGEPDR AIANYDQALQ LNPRYIVAYI
NRGDAFRSKG ECDRAVSDYN QGLELDHNNV LAYNNRGLCF QNRGEYDLAI ADYDHALQID
PKYATAFVNR GFAFQKKSEY DRAIADYDRA LQLDPKSAVA YNNRGFAFQS KGAYDLAIAD
YDHALLLKPG LANAYYHRGT VFSFKGNLDH SISDLSEAIR LNPKYAEAYQ DRGITYQARG
EPDRALADFA EAARLKPELE DDAAFLTARR EAQAAQTSRT AAAVVVTAVQ TSPVVSPPTM
SVITPLSERR VALVIGNGAY TSVAALDNPT RDASAIARSL RQAGFKSVRL ENDLRYDDLR
RALNSFSAEA DQADWAVVYY AGHGIEVGGT NYLVPVDAQL KTDRAVQFEA VPLDQVLGSI
EGARKLRLVI LDACRDNPFL QQMTRTVSSR SVGRGLAKIE PETSGTLVAF AAKHGQVALD
VQDGQANSPF ATALIKNIAK PDTEIRKMFG LVHDDVMAST GRKQEPFVYG ALGGEDYFFS
MR
|
|---|
| |