Gene Mnod_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1932 
Symbol 
ID7304599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand+ 
Start bp2027787 
End bp2028806 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content66% 
IMG OID643599667 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_002497224 
Protein GI220921923 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.101761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGATTC AGAAGAACTG GCAAGAGCTG ATCAAGCCGA ACAAGCTCGA AGTCGCCCCG 
GGGCACGACC CCAAGCGCAT CGCGACCGTG GTGGCCGAGC CGCTTGAGCG CGGCTTCGGC 
ACGACCCTCG GCAACGCGCT GCGCCGCGTG CTGCTGTCCT CGCTCCAGGG CGCGGCCGTG 
ACCTCGGTCC ATATCGACGG CGTGCTGCAC GAATTCTCGT CGATCCCCGG CGTGCGCGAG 
GACGTCACCG ACATCGTCCT CAACATCAAG ACCATCGCGA TCCGGTCGAG CAGCGACACG 
CCCAAGCGCA TGACGCTGCG CAAGACCGGG CCGGGCCTCG TCACGGCGGG CGACATCAGC 
ACGATCGGCG ACATCCAGAT CCTCAACCCC GATCTCGTGC TCTGCACGCT CGACGAAGGG 
GCGGAGATCC GCATGGAGTT CACGGTCGCC ACCGGCAAGG GCTACGTCCC GGCCGACCGC 
AACCGGCCCG AGGACGCGCC GATCGGCCTC ATCCCGGTCG ACGCCCTGTT CTCGCCCGTC 
ACCAAGGTGT CCTACCGCAT CGAGAACACC CGCGAGGGCC AGGATCTCGA CAAGGACAAG 
CTGACCATGA CGGTCGAGAC CAACGGCGCG GTCTCGCCGG AGGATGCGCT CGCCTACGCG 
GCCCGCATCA TCCAGGATCA GCTCCAGATC TTCGTGAACT TCGAGGAGCC CCGCAAGGAG 
GAGGCCGCAC CGCTTGCGCC GCAGCTCCCC TTCAACCCGG CGCTGCTCAA GAAGGTGGAC 
GAACTCGAAC TGTCGGTCCG CTCGGCGAAC TGCCTGAAGA ACGACAACAT CGTCTATATC 
GGCGACCTCA TCCAGAAGAC GGAAGCCGAG ATGCTGCGCA CGCCGAATTT CGGCCGCAAG 
TCGCTCAACG AGATCAAGGA GGTGCTCGCC GCCATGGGCC TGCACCTCGG CATGGACGTT 
CCCGGCTGGC CGCCGGAGAA CATCGAGGAC CTCGCCAAGC GGTTCGAGGA GCACTACTGA
 
Protein sequence
MVIQKNWQEL IKPNKLEVAP GHDPKRIATV VAEPLERGFG TTLGNALRRV LLSSLQGAAV 
TSVHIDGVLH EFSSIPGVRE DVTDIVLNIK TIAIRSSSDT PKRMTLRKTG PGLVTAGDIS 
TIGDIQILNP DLVLCTLDEG AEIRMEFTVA TGKGYVPADR NRPEDAPIGL IPVDALFSPV 
TKVSYRIENT REGQDLDKDK LTMTVETNGA VSPEDALAYA ARIIQDQLQI FVNFEEPRKE 
EAAPLAPQLP FNPALLKKVD ELELSVRSAN CLKNDNIVYI GDLIQKTEAE MLRTPNFGRK 
SLNEIKEVLA AMGLHLGMDV PGWPPENIED LAKRFEEHY