| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1928 |
|---|
| Symbol | |
|---|
| ID | 7304595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 2024205 |
|---|
| End bp | 2025542 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643599663 |
|---|
| Product | preprotein translocase, SecY subunit |
|---|
| Protein accession | YP_002497220 |
|---|
| Protein GI | 220921919 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCTG CAGCCGAGCA GCTCGCCGCC AACCTGAACT TCGGCGCCAT CGCCAAGGCG
GAGGAGCTCA AGAAGCGCAT CTGGTTCACC CTCGGCGCCC TCATCGTCTA CCGGCTCGGG
ACCTACATCC CGCTGCCGGG CATCGACCCC GACGCGCTCC GGCAGAGCTT CGCCAATGCG
CAGGGCGGCG TGCTCGGGCT GTTCAACATG TTCTCGGGCG GGGCGGTCGA GCGCATGGCG
ATCTTCGCGC TCAACATCAT GCCCTACATC TCGGCCTCGA TCATCGTGCA ACTCCTGACC
TCGGTGCTGC CCTCCCTCGA GGCGCTGAAG AAGGAGGGCG AGTCGGGCCG CAAGGTGCTC
AACCAGTACA CCCGCTACCT CACGGTTGTG CTCGCCGTCT TCCAGGCCTG GGGCATCGCG
GTCGGCCTGC AGAGTTCCGG CGGCATCGTT CAGGAGCCCG GGCCGTTCTT CGCCATCTCC
ACGGTGATCA CGCTCACGGG CGGCACCCTG TTCCTGATGT GGATCGGCGA GCAGATCACC
TCGCGGGGCA TCGGCAACGG TTCCTCGCTG ATCATCTTCG CGGGCATCGT TGCGCATCTG
CCCTCCGCCA TTGCGGGCAC GCTCGAACTC GGCCGTCAGG GCGCGCTCTC GACCGCCGTG
ATCCTCGGCG TCGCCGTCAT GGCCGCGGCG GTGGTCTACT TCATCGTGTT CATGGAACGC
GCGCAGCGCC GTCTCCTGAT CAACTACCCG AAGCGCCAGG TCGGCAACCG CATGTATGAG
GGCCAGACCT CGTTCATGCC GCTCAAGCTC AACACGCCGG GCGTGATCCC GCCGATCTTC
GCCTCCTCGC TGCTGCTGCT GCCCGCCACG GCGGCGAGCT TCCAGACCGA TCCGAACGGC
ACCGGCATCG TCGCCACGCT GGCGACCTAT CTGGGCCATG GCCGGCCGCT CTACATGATC
CTGTATGCGG CGCTGATCAT CTTCTTCGCC TTCTTCTACA CGGCGGTGGT GTTCAACCCG
CAGGAGACGG CCGAGAACCT CAAGAAGCAT GGCGGCTTCA TCCCGGGGAT CCGGCCCGGC
GAGCGCACCG CGGAATACAT CGACAAGGTG CTGAGCCGCA TCACCGTGAT CGGCGCCGCC
TACCTCACCC TGATCTGTCT GATCCCGGAG ATCCTGGTCT CCTACGCCTC GCTGCCCTTC
TACTTCGGCG GAACCTCGCT CCTGATCGTG GTCTCGGTCA CGATGGATAC GGTTGCTCAA
GTTCACGGCC ATCTTCTGGC GCACCAGTAC GAGGGCCTGG TGAAGAAGGC GAAGCTCCGC
GGGGCCCGGC GTCGTTAG
|
|---|
| Protein sequence | MASAAEQLAA NLNFGAIAKA EELKKRIWFT LGALIVYRLG TYIPLPGIDP DALRQSFANA
QGGVLGLFNM FSGGAVERMA IFALNIMPYI SASIIVQLLT SVLPSLEALK KEGESGRKVL
NQYTRYLTVV LAVFQAWGIA VGLQSSGGIV QEPGPFFAIS TVITLTGGTL FLMWIGEQIT
SRGIGNGSSL IIFAGIVAHL PSAIAGTLEL GRQGALSTAV ILGVAVMAAA VVYFIVFMER
AQRRLLINYP KRQVGNRMYE GQTSFMPLKL NTPGVIPPIF ASSLLLLPAT AASFQTDPNG
TGIVATLATY LGHGRPLYMI LYAALIIFFA FFYTAVVFNP QETAENLKKH GGFIPGIRPG
ERTAEYIDKV LSRITVIGAA YLTLICLIPE ILVSYASLPF YFGGTSLLIV VSVTMDTVAQ
VHGHLLAHQY EGLVKKAKLR GARRR
|
|---|
| |