Gene Mnod_1923 details

Gene Information

• Locus tag: Mnod_1923
• Symbol: rplF
• ID: 7304590
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium nodulans ORS 2060
• Kingdom: Bacteria
• Replicon accession: NC_011894
• Strand: +
• Start bp: 2021666
• End bp: 2022199
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643599658
• Product: 50S ribosomal protein L6
• Protein accession: YP_002497215
• Protein GI: 220921914
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.591582
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCGCG TAGGCAAGAA GCCCGTACCC GTCCCGGCCG GCGTCACCGC CACCGTCGAT 
GGCCAGACCG TGAAGGTCAA GGGTTCGAAG GGCGAGCTGC AGTTCCGCGT GCCCGACCAG 
GTGGCGGTCA CGCACGAGAA CGGCGCAATC TCGGTCCAGC CCCGCTCGCA GACCAAGGAG 
GCCCGCGCGC TGTGGGGCCT CTCGCGCGCC CAGGTCGCCA ACCTCGTCGA GGGTGTGACC 
AAGGGCTTCG AGAAGAAGCT GGAGATCAAT GGCGTCGGCT ACCGCGCCGC GGTCGCCGGC 
AAGGTGCTGA AGCTGTCCCT CGGCTACAGC CACGACATCG AGTACGAGAT CCCGGCCGGG 
ATCACGATCA CGACCCCGCG TCCGGTCGAG ATCATCGTGG CCGGCATCGA CAAGCAGCGC 
GTCGGCCAGA TCGCCGCGGA GATCCGCGAG TATCGCAGTC CCGAGCCCTA CAAGGGCAAG 
GGCGTGAAGT ACGCCGACGA GTTCATCTTC CGCAAGGAAG GCAAGAAGAA GTAA 

 

Protein sequence

MSRVGKKPVP VPAGVTATVD GQTVKVKGSK GELQFRVPDQ VAVTHENGAI SVQPRSQTKE 
ARALWGLSRA QVANLVEGVT KGFEKKLEIN GVGYRAAVAG KVLKLSLGYS HDIEYEIPAG 
ITITTPRPVE IIVAGIDKQR VGQIAAEIRE YRSPEPYKGK GVKYADEFIF RKEGKKK