Gene Mnod_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1909 
SymbolrplD 
ID7304576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand+ 
Start bp2015163 
End bp2015783 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content69% 
IMG OID643599644 
Product50S ribosomal protein L4 
Protein accessionYP_002497201 
Protein GI220921900 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00049189 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCG AGATCACGAC GCTCGACGGC GCTGACGCCG GTTCGGTCGA GCTCGACGAG 
GCCATCTTCG GGCTGGAGCC CCGCGCCGAC CTGCTGCAGC GCTGCGTGCG CTGGCAGCTC 
GCCAAGCGCC AGGCCGGCAC CCACAAGGTG AAGACGCGGT CCGAGATCAG CCGGACCACG 
AAGAAGATGT ACAAGCAGAA GGGCACCGGC AACGCCCGTC ACGGCGCGGC CTCGGCGCCG 
CAGTTCCGCG GCGGCGCCCG CGCCTTCGGG CCGGTGGTGC GCTCCCATGC CCATGACCTG 
CCCAAGAAGG TGCGGGCGCT GGCGCTGCGG CACGCGCTGT CGGCCAAGGC CAAGGACGCG 
TCGCTGATCG TCGTCGACGA CGTGCGGCTC GAGGACGGCA AGACCAAGGC GCTCAAGGAG 
TGCTTCGGCA AGCTCGGCCT GTCGAACGCC CTCATCATCG GCGGCACCGA GGTGGACGAG 
AACTTCGGCC GCGCGGCGCG CAACCTGCCG TCCATCGACG TCCTGCCGGT GCAGGGCATC 
AACGTCTACG ACATCCTGCG GCGCGACAAG CTCGTCCTGA CGCGCGCGGC CGTCGATGCG 
CTGGAGGCGC GTTTCAAATG A
 
Protein sequence
MKFEITTLDG ADAGSVELDE AIFGLEPRAD LLQRCVRWQL AKRQAGTHKV KTRSEISRTT 
KKMYKQKGTG NARHGAASAP QFRGGARAFG PVVRSHAHDL PKKVRALALR HALSAKAKDA 
SLIVVDDVRL EDGKTKALKE CFGKLGLSNA LIIGGTEVDE NFGRAARNLP SIDVLPVQGI 
NVYDILRRDK LVLTRAAVDA LEARFK