Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_1791 |
Symbol | |
ID | 7302405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 1887045 |
End bp | 1889399 |
Gene Length | 2355 bp |
Protein Length | 784 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643599526 |
Product | general secretion pathway protein D |
Protein accession | YP_002497084 |
Protein GI | 220921783 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGTCG CGCGCATTGG CTCCGGAGCG CTGTTGATTG CGGGGCTTCT GGGCGTGTTC GGTCCGGCGC GGTCGGAGGA TCTGTCGCGT GCGACGCTGG CCGGTCCGGA GATGAGCCTG GACCTGAGCG CGCGGCCGAC CCGGCCGGCG GGTGCGAAGG CGGGGCGCGA GGGCGGCCTC GTGCCTCGCG ACGGCAAGCT TGGGCGCAGC TACCACTTTC CTCCTGAGCC GGTGGAGACG ACCGCCGGCC TCCCCATCGA CCTCAACGAG CCGCTGGAGG TGGGCAACGG GCCGGGCGGG GAGGGAAGCT ACCGCCTGAA TTTCGAACGG GCCGACATCA AGGACGTCCT GCGCACGGTG CTCACCGAGA CGCTCGGCCT CAGCTACAGC CTGGGCGCGG ACATCTCGGG CCAGATCACC ATCTCGTCGC CGCGCCCCCT GACCCGGGCC GAGATGCTGG GCGCCATCGA GAGCGTGCTC GCGAGCCAGG GCCTCGCGCT CACCCGCAAC GGCGCGGGCT ACCTGATCGC CCCGACGGCC CTCGGGGCGG GCTCGGTGAA TTTCGGTGCC GGCGCGCAGG CCGGCTACGG CGTCTCCGTC GTCCCCCTCC GCTACGTCTC GGCCGCCGTG ATGTCGCGCC TCGTCTCGGG CTTCGTGACG GAGGCGGACG GGGTGCGCTT CGACATCTCC CGCAACACCA TCGTGCTCAA GGGGCCGGGC CCGAAGCGGC AGGAGGCGGT GAGCGCCATC CTCTCGCTCG ATGCGGATTG GATGCGGGGT CAGTCGGTCA GCCTGTTCGA GCTGCGCCGC GTGCGGCCCG AGGCCGTGGT GGCCGAACTC GCCCAGCTCT TCGACACCGG CGAGAACGGC GCCGGCTCCG GCCTCATCCA GTTCAAGCCG GTGTCGCGGA TGCGCGCCGT GCTCGTCCTG TCGAAGAACC CGACCCTGAT CCGCCGGGCT GAGACCTTCA TCCGCAAGCT CGACACCATG AGCGAGGCCG CGGAGGAGAA CGTCTTCGTC TACAAGGCGC GCTACCGCGA CGCGCGCGAA CTCGCCCGCG TGGTCAATGG CCTGTTCGGC AACGGCCAGG GTGGCGTCGG GCCGGCGGGC CCGGCCGGGA CCGGTTTCGC GCAGAACCGC GCCGGCGCGG GGAGCGGGGC CGGCGGCGGG CTCGGCGGCC ACGGCCTGTC GGGCGGCGGG CTCGGCGGGT CGGGCTTCGG CGGGGGCGGC CTGTCCGCTC CGGGCGGGTC CAGCCTCGGC GCGCCCGGAC AGCAGCCCGG CGGCAACGGC ACCGACCTCC TGCGGGCACG CTTCGCCTCG GCCTTCGGGG ATGCGGTGCC GGCCGCTCCG GCCGATGCGC CGGGCGCGGG CACCAACAGC GCGATGATCG ACCTGACGAC GCAGCCCGGC GCGCGCGGCC GCGGTGTCGC CATCAGCGCC GATCCGGCCA ACAACTCGGT CATCACCTAC GCGGACGGCG ACACCTACAA GAAGGTCTAC GCCGCTCTGC GGCGCCTCGA CGCCACCCCC GCCCAGGTCG CCGTCAACGT CACCATCGCC GAGGTGCGGC TGAACGATCA GCTGAAATAC GGCGTGCAGT ACTTCCTCGA CAGCAGCCGC ATCGGGCTCG GCAAGAACAA GGGCTCCTTC GGGCTCGTCA GCGCGGCAGC GACCGGCGCC ACGAACGTGC TGAAGCCCGG GGCCGGGTTC AACTTCCTGG TCGGCGGCTA TTCGGGGCCG GACGTGGTGA TCTCCGCCCT CGACGGCTTC ACGGACGTGA AGGTGCTGTC CTCGCCCTCG CTCGTCGTGC TGGAGAACCA GCCAGCGACG CTGCAGGTGG GCGATTCGGT GCCGATCACC ACCCGCCAGG CGCAGAGCAT CGACTACGCC AACGCGCCGC TCATCAACCA GGTCGAGTTC CGCGATACCG GCATTATCCT CAATGTGATT CCGCGCATCG GCCAGAACGA TGCGGTCACG ATGCAGATCG AGCAGGAGAT CTCGGCGGTG GTGGGCGGCT CCGACACCCT GACGCCGACC ATCTCCAAGC GCCGGGTCGC CAGCACGATC TCGGTGGCGA ACGGCCAGAC GGTGCTGCTC GCGGGCCTGA TCAGCGACAA GCACCAGCGG GAGCGCGACG GGATCCCGTT CCTCAACCGC CTGCCGCAGA TCGGCCAGCT GTTCAGCTCG ACGGATAACG GCGCCGAGCG GACGGAACTC GTGGTGTTCA TCCGGCCGGT GGTGGTGCGC AACGGCCGTG ACGCGCAGCG CGTCGCAGAG GATTACCGCG GCCAGCTCCT CGATGCGGGT GTGCGCCGCG GCGCCCGCGC CGCGGCGCCG GTCCACAAGC CATGA
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Protein sequence | MQVARIGSGA LLIAGLLGVF GPARSEDLSR ATLAGPEMSL DLSARPTRPA GAKAGREGGL VPRDGKLGRS YHFPPEPVET TAGLPIDLNE PLEVGNGPGG EGSYRLNFER ADIKDVLRTV LTETLGLSYS LGADISGQIT ISSPRPLTRA EMLGAIESVL ASQGLALTRN GAGYLIAPTA LGAGSVNFGA GAQAGYGVSV VPLRYVSAAV MSRLVSGFVT EADGVRFDIS RNTIVLKGPG PKRQEAVSAI LSLDADWMRG QSVSLFELRR VRPEAVVAEL AQLFDTGENG AGSGLIQFKP VSRMRAVLVL SKNPTLIRRA ETFIRKLDTM SEAAEENVFV YKARYRDARE LARVVNGLFG NGQGGVGPAG PAGTGFAQNR AGAGSGAGGG LGGHGLSGGG LGGSGFGGGG LSAPGGSSLG APGQQPGGNG TDLLRARFAS AFGDAVPAAP ADAPGAGTNS AMIDLTTQPG ARGRGVAISA DPANNSVITY ADGDTYKKVY AALRRLDATP AQVAVNVTIA EVRLNDQLKY GVQYFLDSSR IGLGKNKGSF GLVSAAATGA TNVLKPGAGF NFLVGGYSGP DVVISALDGF TDVKVLSSPS LVVLENQPAT LQVGDSVPIT TRQAQSIDYA NAPLINQVEF RDTGIILNVI PRIGQNDAVT MQIEQEISAV VGGSDTLTPT ISKRRVASTI SVANGQTVLL AGLISDKHQR ERDGIPFLNR LPQIGQLFSS TDNGAERTEL VVFIRPVVVR NGRDAQRVAE DYRGQLLDAG VRRGARAAAP VHKP
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