| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1733 |
|---|
| Symbol | |
|---|
| ID | 7306350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 1824013 |
|---|
| End bp | 1826130 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643599468 |
|---|
| Product | penicillin-binding protein 1C |
|---|
| Protein accession | YP_002497026 |
|---|
| Protein GI | 220921725 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
|---|
| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0777193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA GGGAGCCGCC ACGGGGCGCG GATCGGAGAT GGGTGCGGCG GAGCATCCGC
CTCGCGCTCC TGTTCCTCGC TGTCCTGGGG CTCGCCGGTG GGACCGGCCT GTGGTGGCGG
TTCGCCCGCG GCGGCGACCT CGACCTCTCC GCCGCCGAGG CCCGCTCCCC CATCGTCCTT
GACCGGCACG GCACGCTGCT GCGCCCCTTC GCGACCGCGG ATGGGCGCTG GCGCCTGCCG
CTCGCCCCGA CGGCCGTCGA TCCGCGCTAC CTCGCCATGC TCATGGCCTA CGAGGACCGG
CGCTTCGCGC ATCATCCCGG GATCGACCCG GCCGCCCTGC TGCGCGCCGC CGGCCAATGG
CTGCGGGCGG GCCGGATCGT GTCGGGGGGC TCGACGCTCT CGATGCAGGT CGCGCGCCTC
GTCGAGCCCC GGGCCGAGCG CTCGCTCGGC GCGAAGCTGC GCCAGATGCG GCGCGCGATC
GAGCTGGAGC GGCGGCTGGG CAAGGAGGGG GTGCTGCGGC TCTACCTCGC CCTCGCCCCC
TATGGCGGAC CGGTCGAGGG CGCGCGGGCG GCGAGCCTCG CCTATTTCGG CCACGAGCCG
GGGCGGCTGT CGCTGGCGGA GGCGGCGCTC CTCGTCGCCC TGCCCCAGGC CCCCGAGACC
CGCCGGCCCG ACCGCTTTCC CGAGGCCGCC AAGCGCGCCC GCGACCGCGT CCTCGATCGC
GCGGCAGCGC GCGGCGTGGT GCGGCGGGAC GAGGCCGAGG CGGCCAAGGC CGAGCCGGTG
CCGCGGCAGC GCCGCCCCTT CCCGATGCTG GCCGCCCATG CGGCAGAGGC CGCCCTGGCG
CAGGCGCCCG CCCGTCCGGT CCATCGCCTC ACCATCGAGG CGCGGCTTCA GGCGAGCCTG
GAGGCGCTCG CCGCGGAGCG GATCGCCGCC CTCGGCCCGG GCCTCTCGAC GGCGATCCTG
GTGATCGACA ACCCCACCGG CGAGGTGCGG GCTCATGTCG GCAGCGCCGG CTATCTCGAT
GCCTCCCGGT CGGGGGCGAT CGACATGGCG GGCGCGCTGC GCTCGCCGGG CTCGGCGCTC
AAGCCCTTCG TCTACGCGCT CGCCTTCGAG AGCGGGCTCG CCCATCCCGA AACGCTGATC
GAGGACCGGC CCTCGCGCTT CGGCGCCTCC TACGCGCCCG AGAATTTCGA CCAGACGTTC
CAGGGCACGG TGACGGCCCG GCGCGCCCTG CAGATGTCCC TCAACGTGCC GGCCGTCGAG
CTTCTGGACC TGGTCGGCCC CGCGCGCTTC ATCGCCCGGC TGCGGGCCGG CGGGGCGGCG
ATCGCGCTCC CCCGGGACGC GGCGCCCGGC CTGCCGGTGG CGCTCGGCGG CCTCGGGATC
ACGCTTGCCG ACCTCGCGCG CCTCTATGCG GGGCTGGCCC GCGGCGGGCT CGTGCCGGAT
CTCGTGCGGC GGCGCGACGC CGACCCGCCG CCCCCGCGCG ACCTGCCCCG CATCGCCGAG
GGCGTGGCCG CCTGGTACGT GGCGGATACC TTGCGCGGCA CGCCGCCGCC GGAGAACGCG
CTGCCGAACC GCATCGCCTA CAAGACCGGC ACCTCCTACG GCTACCGCGA CGCCTGGGCG
GTGGGATTCG ACCGGCGCAT CACCGTCGCG GTCTGGGTCG GGCGGCCGGA CGGGGCGAGC
GTGCCGGGCC TCGTCGGGCG TCTCGCCGCA GCGCCGATCC TGTTCGATGC CTTCGCCCGC
TACGGCGGCG AGCCGGAGCC GGTCGCCGCT CCCCGCGACG CGCTCGTCAC CACTACGGCG
GGCCTGCCGC CGCCCCTGCG CCACATCCGC CGCGACGCCC CGAAGGTGGC CGGCGAGGCG
CCCGGCGCCC CGTTGCGCAT CGCCTATCCG CCGGACGGCG CCCGGGTCGA TGTCGGCCTC
GGCGAAGGCG CGCCCGCTGG GCTCGCCCTC AAGGCGCTCG GCGGCACGCT GCCGCTCACC
TGGATGGTCA ACAGCCTGCC GCTGCCCGAA GCGTCGCGCC GCCAGGCCGA ATGGCAGCCG
GACGGGGCCG GCTTCGCGCG CATCTCCGTC ATGGACGCGA CGGGCGCGAG CGACAGTGTG
GTGGTGCGAT TGGAGTGA
|
|---|
| Protein sequence | MTTREPPRGA DRRWVRRSIR LALLFLAVLG LAGGTGLWWR FARGGDLDLS AAEARSPIVL
DRHGTLLRPF ATADGRWRLP LAPTAVDPRY LAMLMAYEDR RFAHHPGIDP AALLRAAGQW
LRAGRIVSGG STLSMQVARL VEPRAERSLG AKLRQMRRAI ELERRLGKEG VLRLYLALAP
YGGPVEGARA ASLAYFGHEP GRLSLAEAAL LVALPQAPET RRPDRFPEAA KRARDRVLDR
AAARGVVRRD EAEAAKAEPV PRQRRPFPML AAHAAEAALA QAPARPVHRL TIEARLQASL
EALAAERIAA LGPGLSTAIL VIDNPTGEVR AHVGSAGYLD ASRSGAIDMA GALRSPGSAL
KPFVYALAFE SGLAHPETLI EDRPSRFGAS YAPENFDQTF QGTVTARRAL QMSLNVPAVE
LLDLVGPARF IARLRAGGAA IALPRDAAPG LPVALGGLGI TLADLARLYA GLARGGLVPD
LVRRRDADPP PPRDLPRIAE GVAAWYVADT LRGTPPPENA LPNRIAYKTG TSYGYRDAWA
VGFDRRITVA VWVGRPDGAS VPGLVGRLAA APILFDAFAR YGGEPEPVAA PRDALVTTTA
GLPPPLRHIR RDAPKVAGEA PGAPLRIAYP PDGARVDVGL GEGAPAGLAL KALGGTLPLT
WMVNSLPLPE ASRRQAEWQP DGAGFARISV MDATGASDSV VVRLE
|
|---|
| |