Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_1717 |
Symbol | rpoH2 |
ID | 7306334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 1807473 |
End bp | 1808354 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643599452 |
Product | RNA polymerase factor sigma-32 |
Protein accession | YP_002497010 |
Protein GI | 220921709 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGAAA TCGCGGGGAT ACGTCGGCAG TTCGTGCGCA TGGCGATGGA CGCGCCCTTC CTGGAGCGGG AAGAGGAGCG CGGCCTTGCG GTCCGCTGGA AGGATGAACG CGACGAACAG GCCCTGCACC GCCTGATCTC GGCCCATATG CGCCTCGTCA TCGCCCTGGC GGGCCGCTTC CGGCATTACG GCCTGCCCAT GGCCGACCTC GTGCAGGAGG GACATGTCGG CCTGATGGAG GCCGCCGCCC GCTTCGAGCC GGAGCGGGAC GTCCGGTTCT CCACCTATGC CACTTGGTGG ATTCGCGCTT CGATCCAGGA TTACATCCTG CGCAACTGGT CGATCGTCCG GGGCGGCACC TCCTCGGCCC AGAAGGCCCT GTTCTTCAAC CTGCGCCGCC TGCGCGCCCG GCTGATGCAG TCGACCGACG AGCGCGTCGG CGACGAGATC CACAGCCGCA TCGCCACGGC CATCGGCGTC TCCCGCGAGG ACGTGGCGCT GATGGATGCC CGGCTCTCGG GCCCCGACAT GTCGCTGAAC GCCCCCATCA CGGATGAGGG CGACGCATCG GCCGAGCGGG TCGACTTCCT GGTCGACACG TCGCCGCTGC CCGACGAGGC CGTCTCGGAC GCCGTCGACG GCGAGCGGCG GCTGACCTGG CTGCGGCAGG CCCTCACGGT GCTCTCCGAG CGCGAGCTGC GCATCCTGCA CGAGCGGCGC CTGGCCGAGG ATCAGGCGAC CCTCGAAGCC CTGGGGCACC GGCTCGGCAT CTCCAAGGAG CGGGTGCGCC AGATCGAGAA CCGTGCCCTC GAGAAGCTCC GCCGGGCCCT GGCCGAGCGC TTCCCGCAGC AGCATTCGGG CGGCATGAGC GCCTTCGTCT GA
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Protein sequence | MAEIAGIRRQ FVRMAMDAPF LEREEERGLA VRWKDERDEQ ALHRLISAHM RLVIALAGRF RHYGLPMADL VQEGHVGLME AAARFEPERD VRFSTYATWW IRASIQDYIL RNWSIVRGGT SSAQKALFFN LRRLRARLMQ STDERVGDEI HSRIATAIGV SREDVALMDA RLSGPDMSLN APITDEGDAS AERVDFLVDT SPLPDEAVSD AVDGERRLTW LRQALTVLSE RELRILHERR LAEDQATLEA LGHRLGISKE RVRQIENRAL EKLRRALAER FPQQHSGGMS AFV
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