Gene Mnod_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1542 
Symbol 
ID7307620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand+ 
Start bp1630270 
End bp1630770 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content69% 
IMG OID643599277 
Productprotein of unknown function UPF0047 
Protein accessionYP_002496837 
Protein GI220921536 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.462626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGCA TTGAGAGGAT CGCCGAGGGG GAGGTGACGC GGCAGGTCAC GGGCCGGCTC 
ACCGTCGCGA CGCAGGGGCA GGGCTTCACC GAGATCACCG CCGACATCGC GGGCTTCGTG 
CGCGAGAGCG GCCTGACGCA GGCTCTCCTC ACGGTCTTCT GCCGCCACAC CTCGGCCTCG 
CTGACGATCC AGGAGAATGC CGACCCGGAC GTGCGCACCG ACCTCCTCAC CGCCCTCGAC 
CGGCTCGCCC CGCGCCAGGG CGCCTACCTC CACGACGCCG AGCTGCCGGA CCGATTGCAG 
GGACGGATGT TCTACCTGCA TCGGGACGAG GGTCCCGACG ACATGCCGGG CCACATCCGC 
ACGATGCTGA CCGACTCAGG CCTCGCGATT CCGGTGATCG AAAGCCGCCT CGCGCTCGGC 
ACATGGCAGG GCATCTACCT GATCGAGCAC CGGGACCAGC CGCATCGCCG GGAGGTGATC 
CTGCACCTTG CCGGCGCGTG A
 
Protein sequence
MRRIERIAEG EVTRQVTGRL TVATQGQGFT EITADIAGFV RESGLTQALL TVFCRHTSAS 
LTIQENADPD VRTDLLTALD RLAPRQGAYL HDAELPDRLQ GRMFYLHRDE GPDDMPGHIR 
TMLTDSGLAI PVIESRLALG TWQGIYLIEH RDQPHRREVI LHLAGA