Gene Mnod_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1504 
Symbol 
ID7307582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand- 
Start bp1588997 
End bp1590022 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content74% 
IMG OID643599239 
Producthistone deacetylase superfamily 
Protein accessionYP_002496799 
Protein GI220921498 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.170648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCG TCTACACCGA GGATCACCGC AGCCACGACC CGCAGTTCTT CCTGGTGCGG 
GGCCGCGTCA CGCGCACGAC CGAGCAGCCC GAGCGGGCCG ACCGCCTGCT CGCGGGCCTG 
CGCGCGGGCG GCCACAGCCT GGTCGAGCCC CAGACATTCG GGCACGAGGC CCGCGCGCGG 
GTCCACGGCC CCGACTACCT CGCCTTCCTG GCGGAGGCCT GGGACGCCTG GGCGGCCCTC 
GGGGATGCGG CGCCCGAGAT GGTCGCCAAC ATCCACCCGA TGCGCGACGA CGCGACCTAT 
CCGGAGCACA TCGTCGGCCG GCTCGGCTGG CACACGGTGG ACACCGCCTG CCCGATCGGC 
CCCGGCACCT ATGCGGCGGC CTGCGCGGCG ACCGACGTGG CGGCGAGCAC CGCGCAGCTC 
GTCATGGACG GGGAGGATGC GGCCTATGCC CTCTGCCGTC CGCCGGGCCA CCACGCCTAT 
CGCGACCGGG CGGGCGGGTT CTGCTTCTTC AACAACAGCG CGGTGGCGGC CGCGCTCCTG 
CGCACGCGGC ACGCCCGCGT CGCGATCCTC GACGTCGACG TCCACCACGG CAACGGCACG 
CAGGGCATCT TCTACGCCGA CCCGACGGTC CTGACGGTGT CGATCCACGC CGACCCGGCG 
CGGTTCTATC CCTTCGTCTG GGGCTATGCG CACGAGCGCG GCGAGGGCGC GGGGCTCGGC 
GCCAACCGCA ACCTGCCGCT GCCCCTCGGC ACCGGGGACG AGGGCTATCT GGCGACCCTC 
GACGAGGCGG CGCGGATCAT CCGGGCCTTC GGGGCGAGCG CCCTCGTGGT GGCGCTCGGC 
CTCGACGCCT CGGTCTACGA CCCGCTCGCG GGCCTCGCCG TCACGACGGA GGGTTTTTCC 
CGGATCGGGG CGGCGCTCGC GCGGCTCGGG CTGCCGACCG TCCTGGTGCA GGAGGGCGGT 
TATCTGTCCG AACATCTCGG CCCCAACCTC GCGGCGGTGC TGCAGGGGTT CGAGGCGGCG 
CGCTAG
 
Protein sequence
MKAVYTEDHR SHDPQFFLVR GRVTRTTEQP ERADRLLAGL RAGGHSLVEP QTFGHEARAR 
VHGPDYLAFL AEAWDAWAAL GDAAPEMVAN IHPMRDDATY PEHIVGRLGW HTVDTACPIG 
PGTYAAACAA TDVAASTAQL VMDGEDAAYA LCRPPGHHAY RDRAGGFCFF NNSAVAAALL 
RTRHARVAIL DVDVHHGNGT QGIFYADPTV LTVSIHADPA RFYPFVWGYA HERGEGAGLG 
ANRNLPLPLG TGDEGYLATL DEAARIIRAF GASALVVALG LDASVYDPLA GLAVTTEGFS 
RIGAALARLG LPTVLVQEGG YLSEHLGPNL AAVLQGFEAA R