Gene Mnod_1485 details

Gene Information

• Locus tag: Mnod_1485
• Symbol: smpB
• ID: 7301342
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium nodulans ORS 2060
• Kingdom: Bacteria
• Replicon accession: NC_011894
• Strand: +
• Start bp: 1568706
• End bp: 1569179
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643599220
• Product: SsrA-binding protein
• Protein accession: YP_002496780
• Protein GI: 220921479
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.439757
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCGCA AACCGGATCC CGGCCGCCGC ATCGTTGCGG ACAATCGCAA GGCCCGCTTC 
AACTACGAGA TCACCGACAC GGTGGAGGCG GGCATCGCGC TCACCGGCAC CGAGGTGAAG 
TCGCTGCGCG GCGGCAAGGC GACGATCGGG GAGGCCTATG CGGGCCCCTC GGGCGACGAG 
TTCTTCCTGT TCAACGCCTA CATCCCCGAA TACCTCGAGG CCAACCGCTT CAATCACGAG 
ACCAAGCGAC CCCGCCGCCT GCTGCTGCAC CGGCGCCAGA TCAACAAGTT CCTGGGCGCC 
ACCCAGCGCG AGGGCTACAC GGTCATTCCG CTCAAGATCT ATTTCAACGA GCGTGGCCGG 
GCGAAGGTCG AACTCGGCCT CGGGCGGGGC AAGAAGCTGC ACGACAAGCG CGAGACCGCC 
AAGGAGCGCG ACTGGCAGCG CGACCGCGCG CGGCTCCTGC GCGACAAGGG GTGA 

 

Protein sequence

MARKPDPGRR IVADNRKARF NYEITDTVEA GIALTGTEVK SLRGGKATIG EAYAGPSGDE 
FFLFNAYIPE YLEANRFNHE TKRPRRLLLH RRQINKFLGA TQREGYTVIP LKIYFNERGR 
AKVELGLGRG KKLHDKRETA KERDWQRDRA RLLRDKG