| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1441 |
|---|
| Symbol | |
|---|
| ID | 7301298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 1519407 |
|---|
| End bp | 1523102 |
|---|
| Gene Length | 3696 bp |
|---|
| Protein Length | 1231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643599179 |
|---|
| Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
|---|
| Protein accession | YP_002496739 |
|---|
| Protein GI | 220921438 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTCG CCCGAGAGGT TGCCGTGGAT AGCCCCGATG CGTTCGGGCG CTTCATTGCC
GGGACGCGTC ACCAGACAGG CTTACGTGCG GCCGTGACCG CGGCTTACCG CCGTCCCGAA
GGCGAATGCG TGCAGGCCCT TCTGCCGCTG GCCGCCCTGC CGGAGGCGCA GGCGCGTGCG
GTCGCCGGCA CGGCCGAGCG GCTCGTGCGG GCGCTGCGGG AGAAGAAGCG CTCCGGCGGC
GTGGAGGGCC TGATCCACGA ATACGCGCTC TCAAGCCAGG AGGGCGTGGC CCTCATGTGC
CTGGCCGAGG CGCTGCTGCG CATTCCCGAC GATGCCACAC GCGATGCCCT GATCCGGGAC
AAGATCGCAA CCGGCGACTG GAAGAGCCAT GTCGGGCACT CGCCCTCGCT CTTCGTCAAT
GCGGCAACCT GGGGCCTGGT CGTCACCGGC AAGCTCACCG CCACCACGAG CGAGTCGAGC
TTGTCGGCGT CCCTCACCCG CCTCATCGCC AAGGGCGGCG AGCCCCTGAT CCGCCGCGGC
ACCGACCTAG CCATGCGGCT GATGGGCGAG CAGTTCGTGA CCGGCCAGAC CATCGCCGAG
GCGCTGGCGA ACAGCCGGCG GATGGAGGCC AAGGGGTTCC GCTACTCCTA CGACATGCTG
GGCGAGGCGG CGACGACAGC CGCGGACGCG GCGCGCTACC TCGCCGACTA CGAGGGGGCG
ATCCACGCCA TCGGCAGGGC CGCGCAGGGG CGCGGCATCT ACGAGGGGCC GGGGATCTCC
ATCAAATTGT CCGCCCTGCA CCCGCGCTAC AGCCGCGCCA AGATCGAGCG CGTGATGGGC
GAGCTGCTGC CGCGGGTGAA GGGCCTGGCG CTGCTCGCGA AAGGCTACGA CATCGGCCTC
AACATCGACG CGGAGGAAGC CGACCGGCTG GAGATCTCGC TCGACCTCCT GGAGGCCCTG
GCGCTCGATC CGGACCTGTC GGGCTGGAAC GGCATCGGCT TCGTGATCCA GGCCTACGGC
AAGCGCTGCC CGTTCGTGGT CGACTGGATC GTCGACCTCG CGCGCCGGGC CAACCGGCGG
ATCATGGTGC GGCTGGTCAA AGGCGCCTAC TGGGACAGCG AGATCAAGCG GGCCCAGACC
GACGGCCTGG AGGATTTTCC GGTCTTCACC CGGAAAGTCC ACACGGACGT GTCCTATCTC
GCCTGCGCAC GCAAGCTCCT TGCGGCGCCC GATGCGGTTT TCCCGCAGTT TGCGACCCAC
AACGCGCAGA CGCTCGCCGC GATCATGACG ATGGCGGGCC CGAACTTCTA TCGCGGCCAG
TACGAGTTCC AGTGCCTGCA CGGCATGGGC GAGCCGCTCT ACGAGGAGGT CGTCGGTCCG
GATAAGCTGA ACCGGCCCTG CCGGATCTAT GCGCCGGTCG GCACCCACGA GACACTGCTC
GCCTACCTGG TGCGCAGGCT GCTGGAGAAC GGGGCCAACT CCTCGTTCGT CAACCGCATC
GCCGATGAGA AGGTGCCGAT CGCGGACCTG ATCGCCGATC CCGTCACGGT CGTCCAGGCG
ACGAACCCCG CGGGCGAGCC TCATGAGCGG ATCACATTGC CCCGTCATCT CTTCGGCCCG
GACCGGGAGA ACTCGGCCGG CCTCGACCTG TCGAACGAGG AGCGGCTCGC GGCCCTCGCC
GAAGACCTCA AACGAAGCGT GGCGCAGGAT TGGCAGGCCC TTCCGTCGAA GGCCAAGGCG
CCGGCGCCGC TGACGGACGT CCGCAACCCC GCCGATCGCC GCGATGTCGT CGGCCGCTGG
CGGGAAGCGA CCGCAGCGGA AATGACCGAG GCCCTCGATG CCGCGGTGCA GGCCGCACCC
GGGTGGGCGG CAACGCCGGC CGGCGACCGT GCGGCCGCAC TCCGCCGCGC GGCGGACCTC
ATGGAGGCGC GCATGGGTAT CCTGATCGGC CTCATCGTGC GGGAGGCCGG CAAGTCGTTC
CCGAACGCGG TGGCGGAGGT CCGCGAGGCG GTCGACTTCC TGCGCTATTA TGCGGCCGAG
GTCGTGCGGA CGCTGGGATC CGACCGGCTC CCGGCGCTCG GGCCGGTCGT CTGCATCTCG
CCCTGGAACT TCCCTCTGGC GATTTTCACC GGGCAGGTCG CCGCGGCACT GGCGGCCGGA
AACGTGGTTC TCGCGAAGCC CGCGGAGGAA ACTCCGCTGA TCGCCGCAGA GGCCGTGCGC
CTCCTGCACG AGGCTGGCAT TCCGATCGAT GGTCTCCAGC TCGTGCCCGG CGCGGGTGCT
GTCGGCGCAG CCCTCGTCGC AGACCCCCGC GTGATGGGCG TGATGTTCAC AGGTTCGACC
GCGGTCGCGC GGCTCATTCA GCGCCAGCTC GCCGATCGTC TGACCGCATC GGATCAGCCG
ATCCCCTTCA TCGCCGAGAC TGGCGGGCAG AACGCACTCG TCGTGGACTC GTCTGCGCTG
GCCGAGCAGG TGGTGGGGGA TGTGATTGCG TCCGCCTTCG ACAGCGCCGG CCAGCGCTGC
TCGGCGCTGC GCATCCTCTG CCTGCAGGAG GAGGTGGCCG ACCGGATCCT GGAGATGCTG
CGCGGCGCGA TGGACGAGCT CGCAGTCGGC AATCCCGGTG ACCTGTCCGT TGATGTGGGG
CCTGTCATCA CGGCCGAAGC CAGGGACGGC ATCGAGCGCC ATGTCACCAC CATGGAGGCC
CGGGGCCACC GGGTCATCCG GCTGCCGCTC GGACCGGAGA CCTCCCACGG GACCTTCGTC
GCACCGACCA TCATCGAGAT CGGGCGGATC GCTGATGTCG AGCAGGAAGT GTTCGGCCCT
GTCCTCCACG TCCTGCGCTA CCGGCGCGCT GACCTCGACC GGCTGATCGA CGACATCAAC
GAGACCGGCT ACGGGCTGAC GTTCGGGCTC CATACACGGA TCGACGAAAC CATCTCCCGT
GTCGTCAACC GGGTGGGTGC CGGCAACGTC TATGTCAACC GCAACATCAT CGGCGCGGTG
GTTGGTGTAC AGCCGTTCGG GGGCTCGGGG CTTTCAGGCA CGGGCCCGAA GGCCGGCGGA
CCGCTCTATC TTGGCCGCCT GATGGGGACC CCGCCGCAAA CGGCCCTGCG CGGTCTTGAT
GCGGCACCGA CAACCCTGTC CGTCGCTCGG ATCTATGCCG ACTGGCTTCG TGCGCAGGGC
TTCGGCGAGC AGGCCGAACG GGTTGTGGGA CATGTCTCGC GCTCGTCGTT GGGAGCCCGT
GTCGAACTGC CCGGGCCCGT GGGTGAGCGG AACGTCTACG CGCTCCGGCC GCGGGGGCGC
GTGGCCGCTC TGGCCAAGAC AGCTGAAGGT CTGCTGGTTC AGGTTGGTGC GATCCTCGCG
ACCGGGAACG TGGCTGTCCT TGACGCAGGC AGCCCGGTGC GCGCTGTGCT CGATCATCTG
CCGAAGGAGG TCCGTCCGAG CATCGAGATT GTGCCCGACT GGCGGGCGAC ACCCGAGCTT
CGGGGCGTCC TGTTCGAGGG TGACCGTGAC GACCTGCTCC AGCTCAACCG CGCGGTTGCC
GCGCGAGAGG GCAGCATCGT GCCTGTGCAA GCCACGACGG CGGCTGCCCT CAAGAACGGT
GACGACTACG ACCTGAACAG GTTGCTGGAG GAGTGCTCGA TCTCGACGAA CACGGCAGCT
GCAGGTGGGA ACGCCAGCCT GATGTCCATC GGGTAA
|
|---|
| Protein sequence | MTVAREVAVD SPDAFGRFIA GTRHQTGLRA AVTAAYRRPE GECVQALLPL AALPEAQARA
VAGTAERLVR ALREKKRSGG VEGLIHEYAL SSQEGVALMC LAEALLRIPD DATRDALIRD
KIATGDWKSH VGHSPSLFVN AATWGLVVTG KLTATTSESS LSASLTRLIA KGGEPLIRRG
TDLAMRLMGE QFVTGQTIAE ALANSRRMEA KGFRYSYDML GEAATTAADA ARYLADYEGA
IHAIGRAAQG RGIYEGPGIS IKLSALHPRY SRAKIERVMG ELLPRVKGLA LLAKGYDIGL
NIDAEEADRL EISLDLLEAL ALDPDLSGWN GIGFVIQAYG KRCPFVVDWI VDLARRANRR
IMVRLVKGAY WDSEIKRAQT DGLEDFPVFT RKVHTDVSYL ACARKLLAAP DAVFPQFATH
NAQTLAAIMT MAGPNFYRGQ YEFQCLHGMG EPLYEEVVGP DKLNRPCRIY APVGTHETLL
AYLVRRLLEN GANSSFVNRI ADEKVPIADL IADPVTVVQA TNPAGEPHER ITLPRHLFGP
DRENSAGLDL SNEERLAALA EDLKRSVAQD WQALPSKAKA PAPLTDVRNP ADRRDVVGRW
REATAAEMTE ALDAAVQAAP GWAATPAGDR AAALRRAADL MEARMGILIG LIVREAGKSF
PNAVAEVREA VDFLRYYAAE VVRTLGSDRL PALGPVVCIS PWNFPLAIFT GQVAAALAAG
NVVLAKPAEE TPLIAAEAVR LLHEAGIPID GLQLVPGAGA VGAALVADPR VMGVMFTGST
AVARLIQRQL ADRLTASDQP IPFIAETGGQ NALVVDSSAL AEQVVGDVIA SAFDSAGQRC
SALRILCLQE EVADRILEML RGAMDELAVG NPGDLSVDVG PVITAEARDG IERHVTTMEA
RGHRVIRLPL GPETSHGTFV APTIIEIGRI ADVEQEVFGP VLHVLRYRRA DLDRLIDDIN
ETGYGLTFGL HTRIDETISR VVNRVGAGNV YVNRNIIGAV VGVQPFGGSG LSGTGPKAGG
PLYLGRLMGT PPQTALRGLD AAPTTLSVAR IYADWLRAQG FGEQAERVVG HVSRSSLGAR
VELPGPVGER NVYALRPRGR VAALAKTAEG LLVQVGAILA TGNVAVLDAG SPVRAVLDHL
PKEVRPSIEI VPDWRATPEL RGVLFEGDRD DLLQLNRAVA AREGSIVPVQ ATTAAALKNG
DDYDLNRLLE ECSISTNTAA AGGNASLMSI G
|
|---|
| |