| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1405 |
|---|
| Symbol | |
|---|
| ID | 7308157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 1487248 |
|---|
| End bp | 1488018 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643599146 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002496707 |
|---|
| Protein GI | 220921406 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.565969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCCA TGCTGGACCC TGCGACCCTC ACCGTGTTCG TCACCGGCGC GACTGCCGGC
TTCGGGGCCG CGCTCTGCCG CCGTTTCGCC GAGGCCGGGG CGCGGGTGAT CGGCACCGGC
CGCCGCCCCG ATCGGCTCGA CGCCCTCAAG GCCGAGCTCG GCGAGCGCTG CCACGTGATG
CAGCTCGACG TGACGGATCG CGATGCGGTC TTCGCCGCGG TGCAGGCCCT GCCGGCCGGC
TTCGACGCCC CCAATGTCTG CATCGCCAAT GCGGGGCTGG CGCTCGGCCT CTCGCCCGCC
CACGAGGCCG AGATCGACGA CTGGGACCGG ATGATCGCCA CCAACGTCAA CGGCCTCGCC
TACACGGTGC GGGCGCTCCT GCCGGGCATG GTGGCGCGCG ACGAGGGGCA TATCGTGCTC
CTCGGCTCGG TGGCGGGCGA CTACCCCTAT CCGGGCGGCA ACGTCTACGG GGCGACCAAG
GCCTTCGTGA AGCAGTTCGC CCTCAACCTC CGGGCCGATC TCCTCGGCCG GAACGTGCGC
GTGACGAATA TCGAGCCCGG CATGGCCGAG ACGGAGTTCT CGCTGGTGCG CTTCGAGGGC
GATGCCGACC AGGCCGCGAA GACCTACGAG GGCCTGACCG CGATGTCGGC CGAGGACATT
GCCGAGACGA TCTTCTGGTC CTGCATCCTG CCGCGCCACC TCAACATCAA CCGCATGCAG
ATGATGCCGG TGATGCAGGC CTTCTCGCCC TTCGCGGTGA AGCGGGGCTG A
|
|---|
| Protein sequence | MIPMLDPATL TVFVTGATAG FGAALCRRFA EAGARVIGTG RRPDRLDALK AELGERCHVM
QLDVTDRDAV FAAVQALPAG FDAPNVCIAN AGLALGLSPA HEAEIDDWDR MIATNVNGLA
YTVRALLPGM VARDEGHIVL LGSVAGDYPY PGGNVYGATK AFVKQFALNL RADLLGRNVR
VTNIEPGMAE TEFSLVRFEG DADQAAKTYE GLTAMSAEDI AETIFWSCIL PRHLNINRMQ
MMPVMQAFSP FAVKRG
|
|---|
| |