Gene Mnod_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1396 
Symbol 
ID7308148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1480470 
End bp1480940 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content71% 
IMG OID643599137 
Productprotein TolR 
Protein accessionYP_002496698 
Protein GI220921397 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.60771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATGG GTCCGCTCCA GACGAGCACC GCGGACGAGG ACGGGTTCGA GGCCGCCCCG 
CTCTCCGAGA TCAACGTCAC GCCGATGGTC GACGTGATGC TGGTGCTGCT CATCATCTTC
ATGGTGGCGG CCCCCCTGAT GACGGTGGGC GTGCCCGTGC AGCTGCCCAA GACCGCCGCC
GCCAAGACCT CCGAGCCCAA GAAGCCGGTC GTGGTCTCGG TGGACAAGGA CGGCAACGCC
TTCCTGGCCA AGGAGCCCCT GCCCGTCGAC GGCGCGCTCG CCCGCCTCAA GGCCGCCGCC
GCGGAGGATC CGACCCAGAC CGTGCTGGTG CGCGGCGACA AGGACGTGCC CTACGGCAAG
GTCATGGAGG TGATGGGCCT CGTGGGCCAG GCCGGGTTCG CCAAGGTCTC GCTCATCGCG
AACGCCCCGA ACGGCGCTCC CGCCACGACG GCGCCGGCCG CGCCCCGGTA G
 
Protein sequence
MGMGPLQTST ADEDGFEAAP LSEINVTPMV DVMLVLLIIF MVAAPLMTVG VPVQLPKTAA 
AKTSEPKKPV VVSVDKDGNA FLAKEPLPVD GALARLKAAA AEDPTQTVLV RGDKDVPYGK
VMEVMGLVGQ AGFAKVSLIA NAPNGAPATT APAAPR