Gene Mnod_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1385 
Symbol 
ID7308137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1471861 
End bp1472592 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID643599126 
Productpyrimidine 5'-nucleotidase 
Protein accessionYP_002496687 
Protein GI220921386 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0603953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCCTGC CCAGCGAGAG CCACGTCACT GCTCCGAACG GCCGCGGGTT CACCGACGTC 
GACACCTGGG TCTTCGACCT CGACAACACG CTCTACCCGC ACGATGCCCG CGTCTGGCCT
CAGGTCGACG AGCGCATCAC CCTCTACGTG ATGCATCTGT TCGGGCTCGA CGGGCTCTCG
GCCCGCGCCC TGCAGAAATA TTTCTATCAC CGCTACGGCA CGACCCTGCG TGCGCTGATG
GACGAGTGGA CGATCGACCC TTACGACTTC CTCGACTTCG CCCACGACAT CGATCATTCG
GGAATCGCCC TCGACCCAGC GCTCGGCCAG GCGATCGAGG GGCTGCCGGG GCGCAAGCTC
ATCCTCACCA ACGGCTCGCG CCGTCACGCC GAGAATGTCG CGAGGAAGCT CGGCATCCTC
GACCATTTCG AGGATGTGTT CGACATCGCG GCCTCCGATT TCGTGCCCAA GCCCGAGCGG
TCGGCCTACG AGAAGTTCCT CGACCGCCAC GGGGTCGATC CGACCCGCTC GGCCCTGTTC
GAGGACATCG CCAAGAACCT CGTCGTGCCC CACGACCTCG GCATGGCGAC GGTGCTGGTG
GTGCCCCGCA CGGTCGATCC CTTCCGGGAT CCCATCGAGC AGGAGGCCGT GAGGGCGCCC
CATATCGACC ACATCACCAA CGACCTCGCC GGATTCCTCA CCGAGCGGGT CGCGCCGACG
CTGCCCCGGT GA
 
Protein sequence
MFLPSESHVT APNGRGFTDV DTWVFDLDNT LYPHDARVWP QVDERITLYV MHLFGLDGLS 
ARALQKYFYH RYGTTLRALM DEWTIDPYDF LDFAHDIDHS GIALDPALGQ AIEGLPGRKL
ILTNGSRRHA ENVARKLGIL DHFEDVFDIA ASDFVPKPER SAYEKFLDRH GVDPTRSALF
EDIAKNLVVP HDLGMATVLV VPRTVDPFRD PIEQEAVRAP HIDHITNDLA GFLTERVAPT
LPR