Gene Mnod_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1164 
Symbol 
ID7304476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1228105 
End bp1229319 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content66% 
IMG OID643598911 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002496473 
Protein GI220921172 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.179963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTGC CCTTCACCGC CCTCGCGGCG GCGCTCGTCT GCGCGACCGC GCTTGCCGGC 
CCGGCGCGCG CTGCGGATCC GATCAAGATC GGCGTATCGG GCCCCTTCAC GGGCGGCTCC
TCCTCCATGG GCGTCTCGAT GCGCGACGGC GTGCGGCTCG CCGTCCAGGA GATCAACCAG
AAGGGCGGCG TGCTCGGGCG CCAGCTCCAG ATCGTCGAGC GCGACGACGA GGCCAAGAAC
GAGGTCGGCG CCCAGGTCGC GCAGGAGCTG ATCAACAAGG AGAAGGTCGT CGCCACGCTC
GGCTTCATCA ATACCGGCGT GGCGCTCGCC GCCCAGCGCT TCTACCAGGA GGCCGAGATC
CCGGTGATCA ACAACGTCGC CACCGGCACG GTCATCACCA ATCAGTTCAA CCCGCCGGAT
TACGACGACA ATTACGTGTT CCGGACCTCG GCCTATGACG TGCTGCAGGC CGGCATGATG
GCCGACGAGG CGATCGCCCG CGGCTTCAAG AAGATCGCGA TCCTGGCCGA TTCCACCAAT
TACGGCCAGC TCGGGCGCGA GGATCTGGAG AAGTACCTCA AGGCCAAGGG CGTGACCCCG
GTCGTGGTGG AGAAGTTCAA CATCAAGGAC GTCGACATGA CGCCCCAGCT GCTGAAGGCG
CAGGCGGCGG GCGCGGACGT GATCCTGGCC TACGGCATCG GGCCCGAACT CGGGCAGGTC
GCCAACGGCA TGGCGAAGCT CGGCTGGAAG GTGCCGATGA TCACCTCCTG GCCGTCCTCG
ATGCAGAGCT TCATCGATAT CGCCGGGCCG AACGGCAACG GCGTGACCAT GCCCCAGACC
TTCATCGAGG ATAAGACCCT GCCGCGGCGC AAGGCGTTCC TCGAAAGCTA CTATGCCACC
TACAAGGTCT CGAAGATCCC GACCCCGGTC GCGGGCGCGC AAGGCTACGA TTCTGTCTTC
CTCCTCGCCG CCGCGATCAA GCAGGCCGGC AGCACCGAGG GGCCGAAGAT CCGCGCGGCG
CTCGAAGATC TGAAGGAGAA GGTCGAGGGC GTGGTGACGA CCTACGACAA GCCCTTCACC
AAGACCGACC ACAACGCCAT CACCCGCAAC ATGGTGGTGT TCGGCAAGGT GCAGGACGGC
CGGATCGTCT ACGCCAAGGA GGAGGACGCC AAGAACGCGG GCGTCGTCCG CCTGAAGGAG
AAGGCGTCGA ACTGA
 
Protein sequence
MRLPFTALAA ALVCATALAG PARAADPIKI GVSGPFTGGS SSMGVSMRDG VRLAVQEINQ 
KGGVLGRQLQ IVERDDEAKN EVGAQVAQEL INKEKVVATL GFINTGVALA AQRFYQEAEI
PVINNVATGT VITNQFNPPD YDDNYVFRTS AYDVLQAGMM ADEAIARGFK KIAILADSTN
YGQLGREDLE KYLKAKGVTP VVVEKFNIKD VDMTPQLLKA QAAGADVILA YGIGPELGQV
ANGMAKLGWK VPMITSWPSS MQSFIDIAGP NGNGVTMPQT FIEDKTLPRR KAFLESYYAT
YKVSKIPTPV AGAQGYDSVF LLAAAIKQAG STEGPKIRAA LEDLKEKVEG VVTTYDKPFT
KTDHNAITRN MVVFGKVQDG RIVYAKEEDA KNAGVVRLKE KASN