| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1015 |
|---|
| Symbol | |
|---|
| ID | 7302559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 1084562 |
|---|
| End bp | 1085407 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643598764 |
|---|
| Product | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
|---|
| Protein accession | YP_002496326 |
|---|
| Protein GI | 220921025 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
|---|
| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.803046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCACG CCGATCTCGC CCGGACCATC GAAGCCGCCT GGGAGGACCG CGCGAGCGTC
GGCCCGACCA CGCAAGGGAC GGTGCGCGAG GCCGTCGAGG CCGCCCTGGC CCTCCTCGAT
TCCGGTCAGG CGCGCGTGGC GGAGAAATCC GGCAGCGCCG ACTGGCAGGT CAACCAATGG
CTCAAGAAGG CGGTGCTGCT GTCCTTCCGC CTCAACGACA TGTCGGTCAT CCCCGGCGGC
CCGGGCGGCG CGGCGTGGTG GGACAAGGTG CCTTCGAAGT TCGAGGGCTG GGATGCCGAC
CGCTTCCGCG CGGCGGGCTT CCGGGCCGTG CCGGGCGCCG TGGTGCGCCG CGGCTCCTAC
ATCGCCCCCG GCGCGGTGCT GATGCCCTCC TTCGTCAATC TCGGCGCCTA TGTGGGCGAG
GGCACCATGG TCGATACCTG GGCGACCATC GGCTCCTGCG CGCAGGTGGG GAAGAACTGC
CACATCTCCG GTGGTGCCGG CATTGCGGGC GTGCTGGAGC CGCTCCAGGC CAACCCGGTC
ATCATCGAGG ACAATTGCTT CATCGGCGCC CGCGCCGAGG TGGCCGAGGG CGTGATCGTC
GGCGAGGGCA GCGTGCTCTC GATGGGCGTC TATATCGGCG CCTCGACCAA GATCATCGAC
CGGGCGACGG GCGAGGTGAT GTATGGCCGC GTCCCGCCCT ATTCGGTCGT CGTGTCGGGC
ACGCAGCCCG GCAAGCCGCT GCCGGACGGC ACGCCCGGCC CCTCGCTCTA CTGTGCCGTC
ATCGTCAAGC GCGTCGATGC CGGCACCCGG GCGAAGACCG GCATCAACGA GCTGCTGCGC
GACTGA
|
|---|
| Protein sequence | MSHADLARTI EAAWEDRASV GPTTQGTVRE AVEAALALLD SGQARVAEKS GSADWQVNQW
LKKAVLLSFR LNDMSVIPGG PGGAAWWDKV PSKFEGWDAD RFRAAGFRAV PGAVVRRGSY
IAPGAVLMPS FVNLGAYVGE GTMVDTWATI GSCAQVGKNC HISGGAGIAG VLEPLQANPV
IIEDNCFIGA RAEVAEGVIV GEGSVLSMGV YIGASTKIID RATGEVMYGR VPPYSVVVSG
TQPGKPLPDG TPGPSLYCAV IVKRVDAGTR AKTGINELLR D
|
|---|
| |