Gene Mnod_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0712 
Symbol 
ID7301463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp783298 
End bp785115 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content73% 
IMG OID643598482 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002496047 
Protein GI220920746 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0997338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTATCA ACAAGGCCTT TGCGACCCTG ATCGACGCCC GCCTCGCGGG TCTCGTGCAC 
GACTCGGTCT CGGAGGAGTC GGGTGAGCGG AGACGCCACG AGCGGTTCCT GATCTCCCGG
CTCGCCACGG GCGCCGTCAC CATGGCGATG CTGCCCCCCT ACCTGCTCTG GCGGGGAGTC
CCGTCGCTGA TCGAGGCGGC GGTGGTGGCC TGCCTGCTGC TGCCGGTCGT CGCTGCCTTC
GCGCTGGTGC GGACGGGACG CCTGACGATG GCGCACAGCC TGTCCTCGGC GGCCCATACG
GGCCTCGTGG TCTGCCTTGC CCATCTCTCG GGCGGCCCGA CCTCGGCGGC GAGCCTATGG
CTCGTGATGA TCCCCATCGA GGCCCTGATG GCGGGCACGC ACCGGGCCGC CATCCAGGCC
GCCGGGTTCG CGGCGGCCGG GGCCGTGGCG ATCGCCGTCA TGGAGCCGGC GAGCGAGCCG
GCGCTCGGCT GGTCCGCCGC CGTGGCGATG CCGATCTTCG CGATCACGGC GATCTGCCAC
GTGCTCTCGC TCGCGATCGA ATACCGGCGG CGCGAGGGCA GCTGGAGCGA CCGTCTGCGC
GCGGCCTCCG CCCGCAACGC CCTGCTCCTC GACGTCGTCG ACGACCTCGT GACCTGGCAC
GACCGCAACG GCGGGGTCCT GCAGGCGAGC CGCGGCGCGA TCCGGCTCGC GGGCGCGAGC
CCGCAATCGC TCCTCGGTCG CGGCCTGCTC GGACGGGTCC ACGTCTCGGA CCGGCCCGCT
TTCCTGAAGG CGATCAGCGA TGCGGCGAGC CTCGACGGGC CGGTGACGGT TCAGTTCCGC
CTGCATGCGG ACCTTCCGGC CTCCGGCGAG CCGGGCCGGG TGATCTGGGC CGAAATGCGC
GCCCACCGGG TGCCGGCCGG CGCGGGCGCC GTGCCGGGCC AGGCTGCCGT GGTGGCGGTG
ACGCGCGACG TGTCCGAGCA CCATCGCCAT GCCGCGGAAC TCGACCGGGC GCGAGCGGAG
GCGGAGCGCG CCGATGCGGT GAAGAGCCGC TTCCTCGCGG TGGTGAGCCA TGAGCTGCGC
ACGCCGCTCA ACGCGATCAT CGGATTCTCG GAGATGCTCT CGGCCGAGGC CGGCCTCACC
TTGCCGGTGG AGCGTCAGCG TGAATACGCG GTCATCATCC AGAGCTCGGG GCGGCACCTG
CTCGAGGTGG TCAACGCCCT CCTCGACCTG ACGAGGATCC AGAGCGGCAG CTTCGACTTC
GCCCCGGAGC CCTTCGACAT CCGCGCCGTG GTGAACGGCT GCTGCGACCT GATGCAGCTG
CGCGCCGACC AGGTCGGGGT CGAGCTCCTG CGCGACGTGC CCCGCGACCT GCCGGAGCTG
ACCGCGGATC CGCGCGCCTG CCGCCAGATG CTGATCAACC TGCTGTCGAA CGCCGTGAAG
TTCACCCCGC GCGGCGGGCG CGTCACGGTC TCGGTGCGGC AGGCCTACGA CCGGATCGAG
CTGTCCGTCA CCGATACGGG CATCGGCATC GCGGAGGCGG ACCTGCCGCG ACTCGGCGAT
CCCTTCTTCC AGGCGGGCGA CGCGGCGGCC TATGCGCGGA TGCACGAGGG CACCGGGCTC
GGGCTCTCGG TGGTGCGCGG CCTCGTGGGC CTGCACGACG GCGAGATGAC GCTGGAGAGC
TCGGTCGCCC GCGGCACCCG CGTGGTGGTC GCGCTGCCCC TCGACTGCCG CGGCGGCCCG
CGGCCGGGCC TGCCGGTCCC GATCCGCACC GCCCCGCTCG CCGAGCCGGC CGCCCTGCCG
CTGCTGCGCG CCGGTTAG
 
Protein sequence
MRINKAFATL IDARLAGLVH DSVSEESGER RRHERFLISR LATGAVTMAM LPPYLLWRGV 
PSLIEAAVVA CLLLPVVAAF ALVRTGRLTM AHSLSSAAHT GLVVCLAHLS GGPTSAASLW
LVMIPIEALM AGTHRAAIQA AGFAAAGAVA IAVMEPASEP ALGWSAAVAM PIFAITAICH
VLSLAIEYRR REGSWSDRLR AASARNALLL DVVDDLVTWH DRNGGVLQAS RGAIRLAGAS
PQSLLGRGLL GRVHVSDRPA FLKAISDAAS LDGPVTVQFR LHADLPASGE PGRVIWAEMR
AHRVPAGAGA VPGQAAVVAV TRDVSEHHRH AAELDRARAE AERADAVKSR FLAVVSHELR
TPLNAIIGFS EMLSAEAGLT LPVERQREYA VIIQSSGRHL LEVVNALLDL TRIQSGSFDF
APEPFDIRAV VNGCCDLMQL RADQVGVELL RDVPRDLPEL TADPRACRQM LINLLSNAVK
FTPRGGRVTV SVRQAYDRIE LSVTDTGIGI AEADLPRLGD PFFQAGDAAA YARMHEGTGL
GLSVVRGLVG LHDGEMTLES SVARGTRVVV ALPLDCRGGP RPGLPVPIRT APLAEPAALP
LLRAG