Gene Mnod_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0120 
SymbolaroE 
ID7304355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp127329 
End bp128219 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content74% 
IMG OID643597897 
Productshikimate 5-dehydrogenase 
Protein accessionYP_002495470 
Protein GI220920169 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.115547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCCGG TACAGCAGCA GCGCTTCCTG CTCGGATTGA TCGGGTCACC GATCAAGCAT 
TCGGCCTCGC CGGCGATGCA CGAGGCGGCG GCGCGCGCCC TCGGCATGCG GGCGCATTAC
CAGCTCATCG ACGTCGCCGG AGCGGGCCCG GCGCTGCTCC GCACGCTCCT CGACGGGCTG
CGCCTGATCG GGTTCGCGGG CGCGAACGTC ACCTTTCCCT ACAAGGAGGC GGTGGTTCCG
CTCCTCGACG ATCTGTCCGA GGGCGCGCGG GCGGTGGGCG CCGTGAACAC GATCGTGGTC
GAGGACGGCC GTCTCGTCGG CCACAACACC GATGCCAGCG GCTTTGCCCG CGCCCTGACG
CAGAGGTTCG GACCGGCTCC GCGCGGCCCC GTCGCGCTGA TCGGCGCCGG CGGCGTCGGG
AAGGCCATCG CGGTGGCGCT CAGCGGGTTC CCCGGGCTTG AGATCCGCCT CGTCGATCGC
GATCCGGCCA AGGCCGCCTC CCTCGCCGCC GCGCTCGCAC CCCGCGCGGC TTTGCGCGTC
TGCGGAACGG TCGAGCAGGC GCTCGACGGT GCGGGCGGCC TCGTCAACGG GACGCCGGTC
GGGATGCTGC CGAACCGCGG CAGTCCGGTT CCGCCGCACC TCCTCCGGCC CGAGATCTGG
GTCGCGGACG CGGTGTATTC GCCGCTGTGG ACGCCGCTCC TCCGGGAGGC GGCGCGCCTG
GGCGCCCCGA CCATGACCGG ACGCGATCTC GCCATCCACC AGGCGGTCGA CGCGTTCCGG
CTGTTCACGG GCGTGGACGC ACCCGAGACC GCGATGGCGC AGGCCTTCGA CGCCGCGATT
GCGGCCCATG CGGAGGAAGG CAGCCCCCCG CCGCCGCGGA GCGACGGATG A
 
Protein sequence
MAPVQQQRFL LGLIGSPIKH SASPAMHEAA ARALGMRAHY QLIDVAGAGP ALLRTLLDGL 
RLIGFAGANV TFPYKEAVVP LLDDLSEGAR AVGAVNTIVV EDGRLVGHNT DASGFARALT
QRFGPAPRGP VALIGAGGVG KAIAVALSGF PGLEIRLVDR DPAKAASLAA ALAPRAALRV
CGTVEQALDG AGGLVNGTPV GMLPNRGSPV PPHLLRPEIW VADAVYSPLW TPLLREAARL
GAPTMTGRDL AIHQAVDAFR LFTGVDAPET AMAQAFDAAI AAHAEEGSPP PPRSDG