Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_0118 |
Symbol | |
ID | 7304353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 124972 |
End bp | 125847 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643597895 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_002495468 |
Protein GI | 220920167 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.758312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCTC CGTCCCGCAT CCTCCTCGGC CTCATCGGCA CCGGCATCCA GGCCTCCCGC ACTCCCCCGA TGCACGAGCA CGAGGGCGAT GCCCAGGGCC TGCGCGTCCT CTATCAGACG ATCGATCTGG AGCGGCTCGG CCTCGGCCCG GAGGCGCTGC CGGAGCTGCT CACCGCCGCC GAGCGCATGG GCTTTGCCGG CCTCAACATC ACGCATCCCT GCAAGCAGGC GGTGATCCCC CATCTCGACG CGCTCTCGCC CGACGCGGCG GCCCTCGGGG CTGTCAACAC GGTGGTGCTG CGGGAGGGCA GGCGGGTCGG CCACAACACC GATTGGTGGG GCTTCGCCGA GAGCTTCCGG CGCAACCTGC CGGGCGCCGC GCTCGGCCGC GTCGTCCAGC TCGGAGCGGG CGGGGCCGGG GCCGCGGTCG CGCACGCGCT GCTGACGCTC GGCGTTCAGG ATCTCGCCAT TGCGGACGTG GATCCCACCC GGGCGGAGCA GGTCGCCGAG GGGCTGTGCG GACGCTTCGG CGCGGGACGC GCCCGGGCCT CGACCGACCT CGCCGCCGAC ATGGCGCAGG CCGACGGCCT CGCCCATTGC ACGCCGACCG GCATGGCGGC CCATCCGGGG CTGCCGCTGC CCGCCGAGCT GCTGCGCCCC GCGCTCTGGG TCGCCGAGAT CGTCTATTTC CCCATCGAGA CCGAGCTGCT GCGCGTCGCG CGCGGCCTCG GCTGCCGCAC TCTCGATGGC GGCGGCATGG CGGTGTTCCA GGCCGTCGAG GCCTTCCGGC TCTTCACTGG GCGCGAGCCC GATCCGGCGC GGATGCTGCG CCACTTCGCC GAACTCGGCG ACAAGGCCGC GAAGACGGCC GCCTGA
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Protein sequence | MSAPSRILLG LIGTGIQASR TPPMHEHEGD AQGLRVLYQT IDLERLGLGP EALPELLTAA ERMGFAGLNI THPCKQAVIP HLDALSPDAA ALGAVNTVVL REGRRVGHNT DWWGFAESFR RNLPGAALGR VVQLGAGGAG AAVAHALLTL GVQDLAIADV DPTRAEQVAE GLCGRFGAGR ARASTDLAAD MAQADGLAHC TPTGMAAHPG LPLPAELLRP ALWVAEIVYF PIETELLRVA RGLGCRTLDG GGMAVFQAVE AFRLFTGREP DPARMLRHFA ELGDKAAKTA A
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