Gene Mnod_0112 details

Gene Information

• Locus tag: Mnod_0112
• Symbol: prfA
• ID: 7304347
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium nodulans ORS 2060
• Kingdom: Bacteria
• Replicon accession: NC_011894
• Strand: +
• Start bp: 117995
• End bp: 119074
• Gene Length: 1080 bp
• Protein Length: 359 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643597889
• Product: peptide chain release factor 1
• Protein accession: YP_002495462
• Protein GI: 220920161
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGCCA TACCCTCCGA CCGACTCGAT GCCATCCTGG CGCGGCACGA CATCGTGACC 
GCGACTCTCA GCGCGGGCGA GGCCGATTCC GAGAGCTTCG TCCAGCTCTC GCGCGAACTC 
TCCGACCTCG ACGACGTCGT GGCGGCGATC CGCGCCTACC GGGCCGCCGA TGCGGAGCTG 
CGCGGCGTCG AGGCGATGCT GGAGGAGGGC GATCCCGAGA TGCGGGCGCT CGCGGCCGAG 
GAGAAGCCCG AGGTCGAGGC CGCCCGCGAC GCCGCCGCCA AGGCGCTCCA GATCCTGCTC 
CTGCCGAAGG ATTCCGCCGA CGAGAAGAGC GCCATCCTGG AGATCCGGGC CGGCACCGGC 
GGCGACGAGG CGGCGCTCTT CGCGGGCGAC CTGTTCCGCA TGTATGCCCG CTACGCCGAC 
CTGAAGGGCT GGAAGGTCGA GGTGGTCTCG GAGAGCCCCG GCACCATGGG CGGCTACCGG 
GAAGTGGTGG CGGAGGTGAA GGGCCGCGGC GTCTTCGCGC GGCTGAAATT CGAGAGCGGC 
GCCCACCGGG TCCAGCGCGT GCCCGAGACC GAGACGCAGG GGCGCATCCA CACCTCGGCG 
GCGACCGTGG CGGTGCTGCC GGAGGCCGAG GAGGTGGACA TCCACGTCAA CGAGGCCGAT 
CTCAAGATCG ACACCATGCG GGCTCAGGGC GCCGGCGGCC AGCACGTCAA CAAGACGGAA 
TCGGCCATCC GCATCACCCA TATGCCGAGC GGCATCGTGG TCTTCGTCCA GGAGGAGCGC 
TCCCAGCACA AGAACCGCGC CCGCGCCATG GCGGTGCTGC GTGCCCGCCT CTACGAGCAG 
GAGCGCAGCC AGAAGGACGC GGCCCGCGCC GCCGACCGCC GCGCCCAGGT CGGCAGCGGC 
GACCGCTCCG AGCGCATCCG CACCTACAAC TTCCCGCAGG GGCGCGTCAC CGACCACCGG 
ATCAACCTGA CCCTGTACAA GCTGGAGGAG GTTCTGGCCG GGACCGCCCT CGACGAGCTC 
GTCGACGCGC TGGTTACCGA GCATCAGGCG GCCCTGCTCG CCGCCGAGGG ACTCGGGTGA 

 

Protein sequence

MIAIPSDRLD AILARHDIVT ATLSAGEADS ESFVQLSREL SDLDDVVAAI RAYRAADAEL 
RGVEAMLEEG DPEMRALAAE EKPEVEAARD AAAKALQILL LPKDSADEKS AILEIRAGTG 
GDEAALFAGD LFRMYARYAD LKGWKVEVVS ESPGTMGGYR EVVAEVKGRG VFARLKFESG 
AHRVQRVPET ETQGRIHTSA ATVAVLPEAE EVDIHVNEAD LKIDTMRAQG AGGQHVNKTE 
SAIRITHMPS GIVVFVQEER SQHKNRARAM AVLRARLYEQ ERSQKDAARA ADRRAQVGSG 
DRSERIRTYN FPQGRVTDHR INLTLYKLEE VLAGTALDEL VDALVTEHQA ALLAAEGLG