Gene Mnod_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0020 
Symbol 
ID7306443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp21557 
End bp22696 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content77% 
IMG OID643597799 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002495374 
Protein GI220920073 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.164397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTCG GCGCCCGCCC GCTCCCGGTC CTCGCCTTCG CGGCCGCCGC GACCGCCGCG 
GCGGCGCTCG CCGGTCTGCC GCTCCTGACC CTGGCGCCGA ACCGGCTCGT CCCGGGTGCA
CCGGTCGGGG CCGGCTGGGC GGGGGCCGGC GCGGCCCTGC TCGGCCTGCT CGCCGCGGGA
TTGCTGTCCG GCACGCGCCG CCGCGATGCG CTCCTGGCGC TCGCCGCCGC CCTCACGGGG
CTCGCAGTGC TGGGCCTCGG CATCGGGGCG GGAGCGGCCG GGCTCCTCGC CGGGCAGCCA
CCGGCCGCGC GGGCCTCCCT CGGCGCGGGG GCGTGGATCG CCGGGCTCGC GCTCGCGCTG
ATCGCGGGCG AAGCGGTCCG GGCCACCGCC CTCCAGGCCG CCGGGCTCTT GACGCTCGCG
ATCTCCGTCC TGGCTGGCGG GATCGCGGTC CATTCCGGAT TGTTCGACTC CCTCTCGCTG
GTGGTGGAGT ACCGCGCCCG CGCCGGGGCG GTGAATGCCG CCATCCTCCA GCACCTCGCG
CTCGCCGCTG GCGCACTGGC GCTCGCCGTT GCGGCGAGCG TGCCGCTTGC GCTTCTGAGC
CTGCGCCGAG GGTTCGCGGC GCGCCTGATC GACACGGCGC TCAACGGCGT TCAGGTCGTG
CCGGCACTGG CGCTCTTCGC CGCTTTGGTC TCCCTGCTGT CGGGCCTGCT CGCGCGGCTG
CCCGGGCTGC GGGAACTCGG CCTCGGGGCG ATCGGGCCGA CCCCGGCCGT GATCGGCACC
GCCGCCTACC TCGCCCTGCC GCTCGTCCGG AGCCTCGCGG CGGGCCTTGC CGCGACGGAT
CCCACCGTCG TCGAGACCGC GCGCGCCCTC GGCCTGACGC CGTGGCAGGT CCTGCTGCGG
GTGCGGCTCC CGCTCGGCGC CCCGATCCTC CTCGGGGGCC TCAGGGTCGC GGCGGTGCAG
AGCATCGGGC TGACGACGCT CGGCGGCCTC GTCGGCGCGG GCGGGCTCGG GGCGGTGGTC
TTCGACGGGA TGGCGCAGTT CGCCCCGGAC CTGATCGTGC TCGGCGCCGT GCCGGTGATC
GCCTTGTCGC TCGCCGTCGA TCGCGGCCTC GCCGCACTCA ACCCCCGGAG GGTCGCATGA
 
Protein sequence
MTLGARPLPV LAFAAAATAA AALAGLPLLT LAPNRLVPGA PVGAGWAGAG AALLGLLAAG 
LLSGTRRRDA LLALAAALTG LAVLGLGIGA GAAGLLAGQP PAARASLGAG AWIAGLALAL
IAGEAVRATA LQAAGLLTLA ISVLAGGIAV HSGLFDSLSL VVEYRARAGA VNAAILQHLA
LAAGALALAV AASVPLALLS LRRGFAARLI DTALNGVQVV PALALFAALV SLLSGLLARL
PGLRELGLGA IGPTPAVIGT AAYLALPLVR SLAAGLAATD PTVVETARAL GLTPWQVLLR
VRLPLGAPIL LGGLRVAAVQ SIGLTTLGGL VGAGGLGAVV FDGMAQFAPD LIVLGAVPVI
ALSLAVDRGL AALNPRRVA