Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_8403 |
Symbol | |
ID | 7300668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011892 |
Strand | - |
Start bp | 139279 |
End bp | 140217 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643597442 |
Product | choline ABC transporter, periplasmic binding protein |
Protein accession | YP_002495019 |
Protein GI | 220919716 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.159983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTGTTT TCCTGGTCCG TGTCCTGTTC GGCGTCTCCC TGTTCGCCAC GCCAGCCGCG GCAGACCCGG CGGCCTGCAA GACCGTGCGC TTCGCCGATG TCGGCTGGAC GGACATCACG GCCACGACCG CGCTCGCCTC CCGGATCCTG ACGGGCCTCG GCTACACCCC GAAGACCCAG ATCCTGTCGG TGCCGGTGAC CTATGCCTCT CTCGGCTCGA AGAACATCGA CGTCTTCCTC GGCAACTGGA TGCCGACCAT GGAGGCGGAC CGGAAGCCCT ATCTCGACAA GAACGAGATC GAGGTCCTGG GGCCGAATCT GACCGGCGCG AAGTACACCT TTGCGGTGCC CGCCTACCTG TACGAAGCGG GTCTGAAGTC ATTCTCGGAC ATCTCCAAGT CTCATCGCCA ACTCAAGGGC AAGATCTACG GCATTGAGCC AGGCAATGAC GGTAACCGGA TGATCCTGGG AATCATCAAG AACAATACTT ACAACCTTGG CAATTTCGAT CTCGTCGAAT CGAGCGAGCA GGGCATGTTG GCTCAGGTCG AGCGCGCGAT CCAGCGCAAG GAGCCGATCC TGTTCCTCGG CTGGGAGCCC CACCCGATGA ACACGAAGTT CCCGATCCGC TACCTGTCGG GAGGCGACGA CACCTTCGGG CCGAACTACG GCGGCGCCGA GATCTTCACC AACCTGCGGG CTGGCTACGT CGCCCAGTGC CCGAACCTCG GACGGCTCTT CAAGAATCTC ACCTTCGACC TTCCCACCGA GAACGTCGTC ATGGGCTCGA TCCTGTTCGA CGGCCTCGAT CCGGAGAAGG CCGCCGACAA GTGGCTCAAG GCGAACCCCG GCGCATGGCA GCGCTGGCTC GACGGTGTCG AGACCTTCGA CGGCAAGCCG GGCCTGCCCG CCGCGCGGGC GAGCCTCGGC CTGAACTGA
|
Protein sequence | MRVFLVRVLF GVSLFATPAA ADPAACKTVR FADVGWTDIT ATTALASRIL TGLGYTPKTQ ILSVPVTYAS LGSKNIDVFL GNWMPTMEAD RKPYLDKNEI EVLGPNLTGA KYTFAVPAYL YEAGLKSFSD ISKSHRQLKG KIYGIEPGND GNRMILGIIK NNTYNLGNFD LVESSEQGML AQVERAIQRK EPILFLGWEP HPMNTKFPIR YLSGGDDTFG PNYGGAEIFT NLRAGYVAQC PNLGRLFKNL TFDLPTENVV MGSILFDGLD PEKAADKWLK ANPGAWQRWL DGVETFDGKP GLPAARASLG LN
|
| |