Gene Mnod_8307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_8307 
Symbol 
ID7300995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011892 
Strand
Start bp47214 
End bp48872 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content67% 
IMG OID643597364 
Productthiamine pyrophosphate protein domain protein TPP-binding 
Protein accessionYP_002494941 
Protein GI220919638 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAGG GATCTGACCT CCTGGTCCAG GCCCTCGAGA ACGAAGGCGT CGACCGGATC 
TTCGGCATTC CGGGCGAGGA GAACCTCGAT GTCGTCGAGA GTCTGCGCAC CTCCCGGATC
GAGCTGGTTC TCACCCGTCA CGAGCAGGCC GCGGCCTTCA TGGCCGCCAC CCATGGACGC
CTGACGGGTC GGCCGGGCGT CTGCCTCTCG ACCCTTGGCC CAGGCGCCCT GAACTTCACG
ACAGGAGCGG CCTACGCGCA TCTCGGCGCC ATGCCGATGC TGATGATCAC CGGCCAGAAG
CCGATCCTGA GCGCCCGCCA GGCCCGCTTC CAGATCGTCG ACATCATCGG GGCGATGCGC
CCGATCACCA AGATGACCCG CCAGATCGTC TCGGCGGCCT CAATCCCGAC CCTCGTGCGC
GACGCCTTCC GGGTCGCCAC CGAGGAGCGC CCCGGCCCGG TCCACCTCGA ACTGCCCGAG
GACATCGCGG CCGAGACGGC CGACGTCGCG ATGGTGCCCT CGCACCCGAT CGACCGGCCG
GTGGCGGCGT CCGCCGCCAT TGAGCGCGCG GCTGCGATGA TCCTGAGTGC GCAACGCCCG
CTGATCATGA TTGGCGCAGC CGGCAACCGG CCGCGGCTGG TCGAGGCGCT CTCCGATTTC
GTGCGGCGGA CGCGCATCCC CTTCTTCAAC ACCCAGATGG GCAAGGGCGC GGTCACGGGC
GGCTCGAATC TCTATCTCGG CACCGCGGCG CTCTCCGAGC GGGACTACGT GCATCAGGCG
ATCGACCGGG CGGACCTGAT CATCTCGATC GGGCACGACA CGGTGGAGAA GCCTCCCTTC
CTGATGGGGC AGGTCGCGGG CGGCCCCAAG GTCATCCACA TCGGCTACGT CTCGGCGAGC
GTCGAGCAGG TATTTCACCC GGATGCCGAG GTGGTGGGCG ATATCGGTTC GACCGTGACG
GCGCTCGCCG ACCGGCTCGG CGGGCGGCTC GATCCGGATC CCGGCATGCT CGACCTGCGC
CGCTCGATCC TGGAGCGCAT CAATGACCGG GCCGAGGAGG ATCGCTTCCC GGTGACGCCG
CAGCGCCTCG TGCATGACGT TCGTGCGGTG ATGCCGGAGG ACGGCATCGT CTGCCTCGAC
AACGGCATGT ACAAGATCTG GTTTGCCCGC AACTATCGCA CGCACGTCGC CAACACGTTG
CTTCTCGACA ACGCGCTCGC CACGATGGGC GCGGGGCTCC CCTCCGCCAT GATGGCGAAG
CTCCTGAATC CGGGCCGGAG GGTGATGGCG GTGTGCGGCG ATGGCGGATT CATGATGAAC
TCGCAGGAGC TCGAGACCGC GGTCCGGCTG AAACTCGACC TCGTGGTGCT CATCCTCGAT
GATTCGGCCT ACGGGATGAT CCGCTGGAAG CAGGCGGTCG ACGCTTTCGC CGATTACGGC
ATGACCTTCG GCAACCCGGA CTTCGTCGCC TACGCCAATT CCTACGGCGC AACCGGGCAT
CGGATCACCG CGGTGAAGGA CCTGATCCCG ACGCTCGAAG CCGCCTTCGC GGCGGGCGGG
GTCCATCTCG TGGCGGTCCC GGTCGATTAT GCCGAGAACA TGCGCGTCCT CGTTGAGGAG
CTCCAACACA AAGCCGGCGC AGCCGAGCCG ACCGGCTAG
 
Protein sequence
MRKGSDLLVQ ALENEGVDRI FGIPGEENLD VVESLRTSRI ELVLTRHEQA AAFMAATHGR 
LTGRPGVCLS TLGPGALNFT TGAAYAHLGA MPMLMITGQK PILSARQARF QIVDIIGAMR
PITKMTRQIV SAASIPTLVR DAFRVATEER PGPVHLELPE DIAAETADVA MVPSHPIDRP
VAASAAIERA AAMILSAQRP LIMIGAAGNR PRLVEALSDF VRRTRIPFFN TQMGKGAVTG
GSNLYLGTAA LSERDYVHQA IDRADLIISI GHDTVEKPPF LMGQVAGGPK VIHIGYVSAS
VEQVFHPDAE VVGDIGSTVT ALADRLGGRL DPDPGMLDLR RSILERINDR AEEDRFPVTP
QRLVHDVRAV MPEDGIVCLD NGMYKIWFAR NYRTHVANTL LLDNALATMG AGLPSAMMAK
LLNPGRRVMA VCGDGGFMMN SQELETAVRL KLDLVVLILD DSAYGMIRWK QAVDAFADYG
MTFGNPDFVA YANSYGATGH RITAVKDLIP TLEAAFAAGG VHLVAVPVDY AENMRVLVEE
LQHKAGAAEP TG