| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4433 |
|---|
| Symbol | |
|---|
| ID | 7300489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4935859 |
|---|
| End bp | 4936443 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643597239 |
|---|
| Product | pilin glycosylation protein |
|---|
| Protein accession | YP_002494816 |
|---|
| Protein GI | 220919512 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
|---|
| TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCCG GCGGCCACGG GAAGGTGGTC GCCGACGCAG GAATGTGCGC GGGGCTGCAG
CTCCTCGCCT TCATCGACGA CGGCGCGACG CCCGGGCAGG CGGTGATGGA CGCACCGGTC
CTGCCCTGGG CCGAGGTCGT GGCGCGGCGT CCGGAGTTCG GTGAAGCTCC GGTGGCGCTG
GCGATCGGCG ACAACGAGCG CCGCCAGCGT GCGCGGGACC GCCTCGTGGC GGCTGGGTTC
CAGATCGCGA CCATCGTCCA TCCGGCGGCG ACGGTGGCGC GCTCCGCGCA CGTGGGCCAG
GGTGCGGTGG TCCTGGCGCG CGCGGTGGTA AATGCCGGGG CGGTGGTGGA CGCCGGCGCG
ATCGTGAACA CCGCTGCTGT CGTGGAGCAC GACTGCGTGC TGGAACCGTT CGCGCACCTC
TCGTCGAGCG CGACGCTATC CGGTGCGGCC CGGGTCGGCG CCCTGGCCGT CGTCGGTGCG
GGTGCGGTGG TGGTTCGCGC ACGGGTGGAG CCAGGCGGCG TGGTCGCTCC GGGAGTCTGC
ATGGTGGGAG ACGCGGCGAA CCCGTTGATC GCGCCCTACC ACTGA
|
|---|
| Protein sequence | MGAGGHGKVV ADAGMCAGLQ LLAFIDDGAT PGQAVMDAPV LPWAEVVARR PEFGEAPVAL
AIGDNERRQR ARDRLVAAGF QIATIVHPAA TVARSAHVGQ GAVVLARAVV NAGAVVDAGA
IVNTAAVVEH DCVLEPFAHL SSSATLSGAA RVGALAVVGA GAVVVRARVE PGGVVAPGVC
MVGDAANPLI APYH
|
|---|
| |