| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4275 |
|---|
| Symbol | |
|---|
| ID | 7298350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4758926 |
|---|
| End bp | 4761064 |
|---|
| Gene Length | 2139 bp |
|---|
| Protein Length | 712 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643597081 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002494658 |
|---|
| Protein GI | 220919354 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGTG TCGAGCCCGT GAAGATCCTG CTGGTCGACG ATCGGCCGGC GAACCTGCTG
GCGCTCGAAT CGGCGCTCTC CGGGGCGGGG TACGAGCTGG TGAAGGCCGG ATCCGGCGCG
GAGGCGCTGC GGTTCCTGCT GCGCGACGAG TGCGCGCTCA TCCTGCTCGA CGTGAACATG
CCGGAAATGG ACGGGTACGA GACCGCGCGC CTGGTCCGGC AGAACCCGCG CACCCGCAAC
ATCCCGGTCG TCTTCATCAC CGCGTACGGC GCCGACGAGC GCCGGGTGCT GAGCGGCTAC
GAGGCGGGCG CGGTCGACTA CCTGTTCAAG CCGGTGACCC CCGAGCTGCT CCGCTCCAAG
GTGGCGGCGT TCGTGGCGCT GCACCGCGCG CAGCGGCAGA TCCTGGCGCA GGCGGAGCAG
CTCCGGGCGC ACGAGCGGCG CGAGCACGCC CTGGCGCTGG CGCAGCTCGA GCTGCAGAGC
CTGCGCCGGC AGGAGGCGGC GCAGAAGCGC TACCGCACGC TGGTCGAGGG GATCACCCAC
GCGCTGGTGT GGGTGATCGA TCCCGACACG CTGGTGTGCC GCTTCGTGAG CCCGAGCGCC
GAGGCGATCC TCGGTCACCC GGCGGACCGC TGGACCGCGG ACCCTGGCCT GTTCGCGGCG
GCGCTGCACC CGGCCGATCG CGACCAGGTG CTGGCGTCGC TCCGCGCCAT CACGGCCGGC
AGCCACGGCA CCACGCTGCA GCACCGCTTC GTGCGCGCCG ACGGGTCCGA GGCGTGGTTC
GAGACGGCGG CGCGGCTCCT GCCCGGCGAG GACGGCGCCG GCCTCGAGCT GCGCGGCTTC
TCGGTCGAGG TGACCGAGGT GGTGGAGGGG CGCGCCGCGC TGGAGCTCCT GGCGCGGGCG
ACCGCCGAGC TGTCCGGCTC GCTCGACTGC CGGGACACGG TCGCGCGCGC CGCGGCGGTG
GCGGTGCCGT CGCTCGGCGA GGGCTGCGCG GTCGAGGTGG TGGTCGATCC GCGCGCCCCG
CCCGTGCGCG CGGTCGCCCA CGTCCGCCCG GAGGCGCGCG AGGCGCTCGA GCGCGTGGCC
CGTCACCCGT CGCTCGGCCG GGGGCCGGAG CGCGGCACCG AGGTGATCCA GGATCCGGCC
GGCCTGCTGG ACGCGGACGG CGAGGGGCTG GCGCGCGATC TCGACGCGCT CGCCGCCGCG
GAGATCGTGC AGGTCGCGCT CACCGCGCAC GACCAGCGCC TCGGCACCAT GCGCCTCTTC
ACCTCGCGCC CGGCGCGCGC CCGCGACCTC GAGCTCGCCG CCGAGCTGGG CCGGCGCGTC
GCGCAGGCGG TGGAGAACGC GCTCCTCTAC CACCGCGCGA AGGAGGCGGT GGAGCTGCGC
GAGCGCTTCC TCTCCATCGC CTCGCACGAG CTGCGCACGC CGCTGGCGGC GCTGCTGCTG
CAGGCTCGCG TGCTGAACCA GCTCCTCGAC ACCGGGCGCA TCCCGGTGCC GCCCGGCTCG
CGCGAGGAGC TGCAGCGGCG CGTACGCGGC GCGGTGAAGC AGGTGGAGCG GCTCGGCGGG
CTCGTGAACA GCCTGTTCGA CCTGGCCCGG ATCCGGAGCG GGCGCCTGGC GCTGGAGCGC
GCCCCCTGCG ACCTCGTCGA GATCGCGCGC GACGTGGCCG GGCGCTTCGA GGACGTGCTC
GCGCTGCAGG GGCGCGCGTT CACGGTGGAG ACGCCGGAGG CGCTGCGCGG CGTGTGGGAC
CGCGGGCGCG TGGACCAGGT CATCACCAAC CTGCTCTCCA ACGCGGTCAA GCACGGCGCG
TCCGGGCCGG TGGCGCTGCG CGTCTCGCGG CGCGGCGCCG CGGTCGAGGT GGCGGTGAAG
GACGCCGGGC GCGGCATCTC CGAGGCGGAC CGGGCGCGCA TCTTCGAGCT GTTCGAGCAG
GGCGAGCGGA GCGCGGGCAC CGGGGGGCTC GGCCTCGGGC TCTACATCAC CCGCAGCATC
GCCGAGGCGC ACGGCGGCCG CGTGTCGGTG GAGGCGCCGG AGGGCGGCGG GGCCGTGTTC
CGGCTGGAGC TGCCGGTCGG CGTGGAGGAG TCCGAGCGCG AGGCTGCGTC GCCACCGGCG
CGGGAGCTCG ACGACGGGCG CGCCCTCGTC GGCGGCTAG
|
|---|
| Protein sequence | MDGVEPVKIL LVDDRPANLL ALESALSGAG YELVKAGSGA EALRFLLRDE CALILLDVNM
PEMDGYETAR LVRQNPRTRN IPVVFITAYG ADERRVLSGY EAGAVDYLFK PVTPELLRSK
VAAFVALHRA QRQILAQAEQ LRAHERREHA LALAQLELQS LRRQEAAQKR YRTLVEGITH
ALVWVIDPDT LVCRFVSPSA EAILGHPADR WTADPGLFAA ALHPADRDQV LASLRAITAG
SHGTTLQHRF VRADGSEAWF ETAARLLPGE DGAGLELRGF SVEVTEVVEG RAALELLARA
TAELSGSLDC RDTVARAAAV AVPSLGEGCA VEVVVDPRAP PVRAVAHVRP EAREALERVA
RHPSLGRGPE RGTEVIQDPA GLLDADGEGL ARDLDALAAA EIVQVALTAH DQRLGTMRLF
TSRPARARDL ELAAELGRRV AQAVENALLY HRAKEAVELR ERFLSIASHE LRTPLAALLL
QARVLNQLLD TGRIPVPPGS REELQRRVRG AVKQVERLGG LVNSLFDLAR IRSGRLALER
APCDLVEIAR DVAGRFEDVL ALQGRAFTVE TPEALRGVWD RGRVDQVITN LLSNAVKHGA
SGPVALRVSR RGAAVEVAVK DAGRGISEAD RARIFELFEQ GERSAGTGGL GLGLYITRSI
AEAHGGRVSV EAPEGGGAVF RLELPVGVEE SEREAASPPA RELDDGRALV GG
|
|---|
| |