| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4241 |
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| Symbol | |
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| ID | 7297895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | + |
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| Start bp | 4723288 |
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| End bp | 4725039 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643597047 |
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| Product | oligopeptide transporter, OPT superfamily |
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| Protein accession | YP_002494624 |
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| Protein GI | 220919320 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00336098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAGA TCGCTCAGGA ATCCTCCACC CCGGCGCCCG GCGCGGCGGG CGCGCCGCAC
CGCGAGCTGA CCGTCCGCGC CGTGGGAGTC GCCATCGTGG TGGCCGCCAT CATGGGCGCG
GCCGAGCCGA CGGTGGTGCT CCGCATCGGC TACGGCCCGA ACATCTCGGT GGTGAGCGCG
TTCCTCGGCT TCATCGTGCT CTCGCTGCTC GGCGTCTTCA CCCGCGTGCG CGCCACGCGC
TGGGAGACGA ACCTGGTGCA GACCGCCGGC ACCGCCGCCG GCTCGGGCGT GGGCTTCATG
TCGGTGGTGC TCGCGGCCAT CGACATGCTG AACCAGCGCG GCCTGCTCGA CCTGCACCTC
AGCCCGCTGC AGATCTTCGC GTGGCTCGCG CCGTCCGGCC TGCTCGGCGT GCTGCTCGCG
GTGCCGCTGC GCAAGCACTA CATCGACCAG GAGAACCTCA CCTTCGCCGA CGGCACCGCC
GCCGGCGAGA CGCTGCTCGT GCTCGACCAG GGGCGCAAGC AGGCGGGGCC GCGCGTGGCG
GCGCTCGGGA TCGGCGGCGC CATCTCGGCC GGCTTCGTGG CGCTGCGCCA GGGCCTGGGC
TGGATCCCGG AGACGATCGC GTTCCGCTTC CTCACCCCGC ACGCCGAGGC GCTCCGCGTC
GGCTCGGAGC TGGGCGTGCT CTCGCTCGGC GCCGGCCTCC TCATCGGCCT GCGGGTCACG
CTCTCGATGG GCCTCGGCCT CGTCCTCGCC TGGCTGGTCG CACCCGAGCC GCTGTTCCGG
GCCGGGCTGG TGCCGGAGCT CACCTTCAAC GCCGTGCTGC AGCGCTGGAT CATGTGGCCG
GCCACCGGGC TGATGGTGGC CGGCGGCCTC GCCGCGCTGG TGCTGAAGTG GAAGGTGATC
GCGAAGACGT TCCGCGGGAT GTCGGCCAAG GGCGCCGGCG ACGGCGGCGA CTTCCCCATG
CGCTGGGTGG TGTGGGGCGC GATCGCCTGC ACGGTGGCGC TGGTGGTGGT GCAGAAGATC
TCGCTCGGCT TCCCCATCTG GCTGTCGCTC GTGTCGGTGG GGCTCTCGCT CATCCTGATG
CTGGTCGGCA TCCGCGTGCT GGGCGAGACG AACTGGGCGC CCATCAGCGC CATGGCGAAC
GTGATGCAGG CGGTGTTCGC GGTGCTCGCG CCGGGCCACG TGCCCATCAA CATGGTGGGC
TCCGGGATGA GCGGCTCGGT GGCCGCGAAC GGCGAGCACC TGATGCAGGA CTACCGGGCC
GGCAAGATCG TCGGCTCCAC CAACCGGAAC CTCACCATCC TGCAGCTCGT CGGCGTGCCG
GTGGGCGCGC TGGCGGTCGC GGTCGCCTAC CCGGCGGTGC GGGCCAAGTA CGGCGTGGGC
GGCGAGGGCG GCCTCACCTC GCCGATCAGC GTGAAGTGGG CCGGGTTCGC CGAGCTCCTC
TCGCAGGGCT TCGGAGCGCT CGCGCCGAGC GCCGTCGCCG CGCTCGGCAT CGCGCTGGTG
CTGGGCGTGG TCCTCACCGT GCTCGAGTCG AACCCGCGCT TCGGCCGGTT CGTGCCCTCC
CCCACCGCGG TCGGCCTCGG GATGCTCATC CCCGGCTTCG CCATCTTCCC CATGGTGGTG
GGCGGCCTCA TCCAGGATCT CTGGAAGCGG CTCTCGCCGC GGACCGAGGG GATCTACAAC
ACCCCGCTCG CGTCCGGCTT CATCACCGGG GAGGCGCTGG TGCTGCTGGT GCTGGCGCTC
CTGGCGCTGT GA
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| Protein sequence | MRKIAQESST PAPGAAGAPH RELTVRAVGV AIVVAAIMGA AEPTVVLRIG YGPNISVVSA
FLGFIVLSLL GVFTRVRATR WETNLVQTAG TAAGSGVGFM SVVLAAIDML NQRGLLDLHL
SPLQIFAWLA PSGLLGVLLA VPLRKHYIDQ ENLTFADGTA AGETLLVLDQ GRKQAGPRVA
ALGIGGAISA GFVALRQGLG WIPETIAFRF LTPHAEALRV GSELGVLSLG AGLLIGLRVT
LSMGLGLVLA WLVAPEPLFR AGLVPELTFN AVLQRWIMWP ATGLMVAGGL AALVLKWKVI
AKTFRGMSAK GAGDGGDFPM RWVVWGAIAC TVALVVVQKI SLGFPIWLSL VSVGLSLILM
LVGIRVLGET NWAPISAMAN VMQAVFAVLA PGHVPINMVG SGMSGSVAAN GEHLMQDYRA
GKIVGSTNRN LTILQLVGVP VGALAVAVAY PAVRAKYGVG GEGGLTSPIS VKWAGFAELL
SQGFGALAPS AVAALGIALV LGVVLTVLES NPRFGRFVPS PTAVGLGMLI PGFAIFPMVV
GGLIQDLWKR LSPRTEGIYN TPLASGFITG EALVLLVLAL LAL
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