| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4018 |
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| Symbol | |
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| ID | 7297360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | + |
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| Start bp | 4475365 |
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| End bp | 4476306 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643596826 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002494403 |
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| Protein GI | 220919099 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00745227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCGA TGAGCACGAC CTCGAATCCG GCGGAGCGCT TCGAGCCGCA CCGCGGCCGC
CTGCTCGGCC TCGCCTACCG CATGCTCGGC TCGATGGCCG ACGCCACCGA CGCGGTGCAG
GAGACCTACC TGCGCTGGCA CGCGGCCGAG CGCGAGGAGG TGGAGGACGC GCGCGCGTTC
CTCATCACCA CGACGACGCG CATCTGCCTC GACCTGCTGA CCTCAGCGCG CGCACGGCGC
GAGGCGTACG TCGGTCCATG GCTCCCGGAG CCGGTCCTCG ACACGGCGGC GCTCGCGCCG
GACGCGCACA CCGAGCTCGC CGAGGATCTG TCGGTCGCGT TGCTCCTGAC GCTCGACCGG
CTGTCGCCGC TCGAGCGCAG CGCCTTCCTG CTGCACGACG TGTTCGACCT GTCGTTCGCC
GAGATCGCCC GGGCGCTGGA GCGAAGCGAG GCTGCGTGCC GGCAGCTCGC CTCCCGCGCC
CGGGCGCGCG TTCGCGCGGC ACGACCGCGC GTCGCGACCG AGCCGGCGGC GCCTCCAGGC
ACGGTGGACT CGAAGCACGC GCAGCTCATG GCCGCGTTCG CGGCCGCGGC GCAGGCGGGC
GACGTGGATG CGCTGATGCG GCTGCTCGCG GCGGACGTGC GCGTGGTGAC GGACGGCGGC
GGCAAGGTGC CGGCGGCGCT GGACGTGGTC GAGGGCGCCG ACCGCGCGGC GCGCTTCCTG
GTCGGGGCCA CGCGCAAGCG CCCGGGCCAG TGGTGGCGCG AGGACTTCAC GGTGCGCTTC
GCGATCGTGA ACGGCCTGCC GGGCGTGGTG GTGGACGGCT CGGACGGACC GGTGCAGACG
TCGGCGTTCG AGATCGAGGA CGGCGTCATC CGGGCGCTCT ACGTCGTCCG GAATCCGGAC
AAGCTGCGGC ACCTGGCGGG CGCGGCTGCG CCGGGCACCT GA
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| Protein sequence | MSSMSTTSNP AERFEPHRGR LLGLAYRMLG SMADATDAVQ ETYLRWHAAE REEVEDARAF
LITTTTRICL DLLTSARARR EAYVGPWLPE PVLDTAALAP DAHTELAEDL SVALLLTLDR
LSPLERSAFL LHDVFDLSFA EIARALERSE AACRQLASRA RARVRAARPR VATEPAAPPG
TVDSKHAQLM AAFAAAAQAG DVDALMRLLA ADVRVVTDGG GKVPAALDVV EGADRAARFL
VGATRKRPGQ WWREDFTVRF AIVNGLPGVV VDGSDGPVQT SAFEIEDGVI RALYVVRNPD
KLRHLAGAAA PGT
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