| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3990 |
|---|
| Symbol | |
|---|
| ID | 7297329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4443014 |
|---|
| End bp | 4443814 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 643596797 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002494377 |
|---|
| Protein GI | 220919073 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCGC CCGGCGCACC CGAGCCGCTC GCCGTCGTCA CCGGCGCCTC CGCCGGCATC
GGCCTGGCCC TGGCGCGCGA GCTGTCGCGC CGGGGCCGGC CGGTCCTGGC GGTGGCCCGC
CGCGAGGACC GCCTCCGCTC GCTCGCGGCC GAGGCGCACG CGGCCGGCCG CGCCGAGATC
CACCCGCTCG CGCTCGACGT CGCCGCGCCG GGCGCGCCGG AGCGGCTGGT CGAGGCGTCG
CGCCGGCTGG GCGGCGCCGG GCTGCTCGTC AACAACGCCG GCCTCGGCCA GTACGGCCGC
TTCGAGCGCG CCGACCCGGC GCGGCTCGCG GCCATGCTGC GCGTCAACTG CGAGGCGCTG
GTGCTGCTCT CGCACGCGTT CCTGCCCGAG CTGCGCGCGG CGGGCGGCGG CGCGATCCTG
AACGTCGCCT CGGCCGCCGC GTTCCAGGCC ACCCCGTACA CGGCGGTGTA CGGCGCCACC
AAGGCGTTCG TGCTCTCGTT CACCGAGGGG CTCGCCGAGG AGCTGCGCGG CAGCAGCGTG
TGGGCGGGCG CGTTCTGTCC CGGGCCGGTG GACACCGAGT TCGGGGAGGT GGCCGGCACC
GGCGGCCGGT TCGGAAAGCC GCCCGGCATG CTCACCGCCG AGGCGGCCGC GCTCGAGGCG
ATCGAGCAGC TCCGCGATCG CGAGGTGGTG TGGGTGCCGC ACCCGATCTA CAAGCTCACC
GCGGCCGCGT CGCGCCTGGT CCCCCGGGCG GTGCTGCGCC GCGTCTCGGG CCGGATCCAC
CGGCCTACGG AGGATGCATG A
|
|---|
| Protein sequence | MAPPGAPEPL AVVTGASAGI GLALARELSR RGRPVLAVAR REDRLRSLAA EAHAAGRAEI
HPLALDVAAP GAPERLVEAS RRLGGAGLLV NNAGLGQYGR FERADPARLA AMLRVNCEAL
VLLSHAFLPE LRAAGGGAIL NVASAAAFQA TPYTAVYGAT KAFVLSFTEG LAEELRGSSV
WAGAFCPGPV DTEFGEVAGT GGRFGKPPGM LTAEAAALEA IEQLRDREVV WVPHPIYKLT
AAASRLVPRA VLRRVSGRIH RPTEDA
|
|---|
| |