Gene A2cp1_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_3843 
Symbol 
ID7297100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp4270148 
End bp4271773 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content68% 
IMG OID643596653 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_002494233 
Protein GI220918929 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCACC TCGGCGTGAT CCAGCAGCTC ATCCTCCAGC AGGCGCAGCA GGCGGCGCCC 
CAGGCGACCA CCACCCTCGG GAAGCCGACC GTCGCGTCCA TCGGCTTCTT CTTCCTGATC
GTGGCGGTGA CGCTCGTCAT CACCTACTTC GCGGCGAAGA AGACCAAGAC CTCCTCCGAG
TTCTACGCCG CCGGCCGCAG CGTGTCCGCG CTCCAGAACG GCTTCGCGCT CGCCGGCGAC
TACATGTCCG CCGCGTCCTT CCTCGGCATC TCCGGCATGG TCGCCCTCAA GGGCTACGAC
GGCATGATCT ACGCCACGGG CTGGCTCGTC GGCTGGCCGG CGCTCATGTT CCTGGTGGCG
GAGCCGCTGC GCAACCTGGG CAAGTTCACG TTCGCGGACG TGGTCGCGTT CCGCCTGCGC
CAGAAGCCGG TCCGCATCGC GGCGGCCATC GGCGGCATCC TGACCGTGCT CTTCTACACC
ATCGCGCAGA TGGTCGGCTC CGGCGCGCTC ATCCAGCTCA TGTTCGGCCT GAAGTACGAG
ATCGCCGAGA TCATCGTCGG CGTGGTCATG CTCGCGTACG TGCTGTTCGG CGGCATGCTC
GCCACGACCT GGGTGCAGAT CATCAAGGCC GGCCTGCTGC TGTTCGGCGT GACCATCCTG
ACCGGGCTCG TGCTCGCGAA GTTCGGCTTC AACCCCGGCA ACCTGTACCA GGCGGTGGTG
GCGCAGTACG GCCAGCCGTC GCTCGAGCCG GGCGGCTTCG TCGCGAACCC GGTGGAGGCG
GTCTCCCTGG GCCTCGCGCT CATGTTCGGC CTGCTGGGCC TGCCGCACAT CCTGATGCGC
TTCTACACGG TCCCGGACGC CAAGGCGGCC CGCAAGTCGG TGCTCTACGC GACCGGCCTC
ATCGGCTACT TCTACCTGAT CATCCCGATC GTCGGCTTCG GCGCGGCCGT GCTCACGCCG
GGCGGGCGCG CGTTCATCAC CTCGGTCGAC AAGGGCGGCA ACATGGCCTC GCCGATCCTG
GCGGAGCAGC TGCTCGGCTC CGGCTTCCTC GGCTTCATCG CCGCGGTCGC GTTCGCGACC
ATCCTCGCGG TGGTGGCGGG CCTCACGCTG GCCGGCGCGT CGGCCTACTC GCACGACATC
TACGTGAACG TCATCAAGGG CGGGCACGCG ACCGAGGAGG AGCAGGTCAA GGCCGCCAAG
ACCGCGACGG TGGTGTTCGG CATCTTCGCG GTGGGCCTGG GCATCCTCTT CAAGGGCCAG
AACGTGGCGT TCATGGTGGG CCTCGCGTTC GCCATCGCGG CCAGCGCGAA CTTCCCGGCG
CTGCTCATGT CCATCGTGTG GAAGCGCTTC ACCACCATGG GCGCGGTCTG GTCGATCCTG
GTGGGCGCGT TCTCGTCCTG CATCATGATC CTGCTGTCGC CGACGGTCTG GGGCGAGGTG
TTCCACCACC TCGACGCCGC GGGCAAGCCC TACGGCATCC TGCCGTGGAA GAACCCGGCC
ATCTTCTCGA TGACCGCCGC GTTCGTCGCG GGCATCGTGG TGTCGCTCGT GACCGCCGAC
CAGACGGCGC AGGACAAGTT CGAGGACGAG AAGCTCCGCA CGTACCTCGG CGTCGGCGCC
GAGTAG
 
Protein sequence
MTHLGVIQQL ILQQAQQAAP QATTTLGKPT VASIGFFFLI VAVTLVITYF AAKKTKTSSE 
FYAAGRSVSA LQNGFALAGD YMSAASFLGI SGMVALKGYD GMIYATGWLV GWPALMFLVA
EPLRNLGKFT FADVVAFRLR QKPVRIAAAI GGILTVLFYT IAQMVGSGAL IQLMFGLKYE
IAEIIVGVVM LAYVLFGGML ATTWVQIIKA GLLLFGVTIL TGLVLAKFGF NPGNLYQAVV
AQYGQPSLEP GGFVANPVEA VSLGLALMFG LLGLPHILMR FYTVPDAKAA RKSVLYATGL
IGYFYLIIPI VGFGAAVLTP GGRAFITSVD KGGNMASPIL AEQLLGSGFL GFIAAVAFAT
ILAVVAGLTL AGASAYSHDI YVNVIKGGHA TEEEQVKAAK TATVVFGIFA VGLGILFKGQ
NVAFMVGLAF AIAASANFPA LLMSIVWKRF TTMGAVWSIL VGAFSSCIMI LLSPTVWGEV
FHHLDAAGKP YGILPWKNPA IFSMTAAFVA GIVVSLVTAD QTAQDKFEDE KLRTYLGVGA
E