| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3839 |
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| Symbol | |
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| ID | 7297096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | + |
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| Start bp | 4265270 |
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| End bp | 4266961 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643596649 |
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| Product | General substrate transporter |
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| Protein accession | YP_002494229 |
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| Protein GI | 220918925 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.241641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGTGT CGTCGGCATC CCCTGTCCGA CCCGTCCCCC CCGACTCCGG GTCACGTGCT
GGAATCACCC GCGAAGAGAA GATGGTCATC TTCGCGTCGT CCCTCGGAAC CGTGTTCGAG
TGGTACGACT TCTACCTGTA CGGCTCGCTC GCGGCGATCA TCAGCAAGCA GTTCTTCGCC
GGCGTCGACG AGCGCACCGG CTTCATCTTC GCGCTGCTCG CCTTCGCCGC CGGCTTCGCG
GTGCGCCCGT TCGGCGCGGT GGTGTTCGGC CGGCTCGGCG ACATGATCGG CCGGAAGCAC
ACCTTCCTCC TCACCATCCT CATCATGGGC GGCTCGACGG CGATCGTCGG CATGCTCCCC
AGCTACGCCA CGATCGGCGT GCTGGCGCCG ATCATCCTCA TCTCCATGCG CATGCTGCAG
GGCCTCGCGC TGGGTGGTGA GTACGGCGGC GCGGCCACGT ACGTGGCCGA GCACGCGCCC
CCGGGCCGGC GCGGCAACTT CACGAGCTGG ATCCAGACCA CCGCCACCCT CGGCCTGTTC
CTCTCGCTCC TCATCATCCT CGGCACCCGC ATCGGCCTGG GGAACGAGGC GTTCGAGAAG
TGGGGCTGGC GCGTCCCGTT CCTGCTCTCG CTGATCCTGC TCGGCATCTC CGTCTACATC
CGCCTCCAGC TGAACGAGTC CCCGGTGTTC AAGCGGATGA AGGAGGAGGG CAAGGCCTCG
AAGGCCCCGC TCACCGAGTC CTTCCTGCGC TGGAACAACC TGAAGATCGT CCTGATGGTG
CTGTTCGGCG GCGTCGCCGG CCAGGCGGTG GTCTGGTACA CGGGCCAGTT CTACGCGCTG
TTCTTCCTCC AGCAGACGCT GAAGGTGGAC CCGACCGCGT CGAACTACAT GATCGCGGCC
TCGCTGATCA TCGGCACGCC GTTCTTCATC GTGTTCGGCA CGCTGTCCGA CAAGATCGGC
CGCAAGCGGA TCATCATGGC GGGCTGCGTG CTCGCCGCGC TGACCTACTT CCCGATCTTC
AAGGGCATCA CGAAGTACGC GAACCCGGCG CTGGAGCACG CGCAGGCGAC GAACCCCGTG
ACGGTGGTCG CCGATCCGAA GGACTGCAGC TTCCAGTTCG ACCCGATCGG CAAGGCCAAG
TTCACGAAGT CCTGCGACGT CGCCAAGGCC TCGCTCGCGA AGAAGGGCGT GCCGTACCGC
AACGAGGAGG CGCCCGCGGG CACCGTCGCC ACCATCAAGA TCGGCGACGT GGCGGTCTCG
AGCTTCGCCG GCAACACGCT CTCGCCGGCA GACTTCAAGA CGCAGAACGC CGCGTTCGAG
AAGACCCTCG GCGACGCCAT CAAGACCGCC GGCTACCCCG CCAAGGCGGA CATGAACCAG
GTGAACTACG TGATGGTCGT GCTGCTCCTG ACCATCCTCG TCATCTACGT GACCATGGTG
TACGCGCCGA TCGCGGCGTG GCTGGTCGAG CTCTTCCCGG CTCGCATCCG CTACACCTCG
ATGTCGCTGC CGTACCACAT CGGCAACGGC TGGTTCGGCG GCTTCCTGCC GACCATCTCG
TTCGCGATGG TCGCCGCCAG CGGCGACATC TACTACGGCC TCTGGTACCC CATCGTCATC
GCGCTCATCA CCGCGGTCCT CGGCACCCTG TTCATGCCCG AGACCAAGGA TCGCGACATC
AACCACGAGT AG
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| Protein sequence | MSVSSASPVR PVPPDSGSRA GITREEKMVI FASSLGTVFE WYDFYLYGSL AAIISKQFFA
GVDERTGFIF ALLAFAAGFA VRPFGAVVFG RLGDMIGRKH TFLLTILIMG GSTAIVGMLP
SYATIGVLAP IILISMRMLQ GLALGGEYGG AATYVAEHAP PGRRGNFTSW IQTTATLGLF
LSLLIILGTR IGLGNEAFEK WGWRVPFLLS LILLGISVYI RLQLNESPVF KRMKEEGKAS
KAPLTESFLR WNNLKIVLMV LFGGVAGQAV VWYTGQFYAL FFLQQTLKVD PTASNYMIAA
SLIIGTPFFI VFGTLSDKIG RKRIIMAGCV LAALTYFPIF KGITKYANPA LEHAQATNPV
TVVADPKDCS FQFDPIGKAK FTKSCDVAKA SLAKKGVPYR NEEAPAGTVA TIKIGDVAVS
SFAGNTLSPA DFKTQNAAFE KTLGDAIKTA GYPAKADMNQ VNYVMVVLLL TILVIYVTMV
YAPIAAWLVE LFPARIRYTS MSLPYHIGNG WFGGFLPTIS FAMVAASGDI YYGLWYPIVI
ALITAVLGTL FMPETKDRDI NHE
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