| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3789 |
|---|
| Symbol | |
|---|
| ID | 7296165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4208737 |
|---|
| End bp | 4209753 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 643596599 |
|---|
| Product | PEGA domain protein |
|---|
| Protein accession | YP_002494179 |
|---|
| Protein GI | 220918875 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000518163 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAC CCTGGCGCCT GCTCCCGCTC CTCGCCCTCG TCACCGCCTC GGCCGCCTCG
ATCCCCGCCG CCGCGCGCGC GGACGACGTG ACGGAGGCGA GCGCGCACTT CCGCAAGGGC
TCGGCGCTGT ACCAGCAGCG GCAGTGGCGC GCCGCCATCG CCGAGTTCGA CGCGGCGTAC
CGGCTGAAGC CGCACGGGGC CATCCACTTC AACGTGGCCC GCTGCCGCGA GCAGCTCCAG
GAGTGGCCGG GCGCGCTGCG CAGCTACACC GATTACCTGC GGGAGGTGCC CGACGCGCGC
GACCGGGCCG CGGTCCGCGC CGCCATCGGC CGCATCGAGG CGCGCCTCGC CGCGGCCGGC
GTGCAGGCGC TGCTCGTGTA CACCGATCCG CCCGGGGCCG AGGTCCGCAT CGACGGCCGG
CCGCGCGGCA CCACGCCGTT CCACCTGACC CTGCCGCCCG GCCCGTACAC GATCGCGCTC
GCGCTCGAGG GCTACGCACC GGTGGAGCAG GCGGTGGAGG TCGGCGCGTC GGCGTCGCGG
GTGGTGGAGG TGGTGCTCCA GCCCGGCTCC GCGCCCGCCC CGGCGCCGCC GGCCGCCCCG
ACCGTCCGCG CCTCGCCGCC CGCCCCGGGC GCGCCCGTCG CCGGCGCCGC TGCCCCGCAG
CCGGGCCGCG CGACCGCGCT GCCGGGGGCC GCGCCCGCCC GCCCCGACCT GTCCGCCCGC
GCGCCCGCCG CGCCGGTGCC GCTCACGCCC GCGCCGCAGG CCCGGCCGTC CCGGCACCGC
GTGTACACCT GGGTCGCGGC CGGCGCCGCC GCCGCGGCGC TCGCCGCCGG CGCGCTCTAC
GGCCAGGCCG CGCAGCGCAA GCGCGATGCG CTGGTGGACG GCGCGCCGCA CGACGACGCC
TCCGCCCTGG CGCGCGACGC GCGCTCGAAG GCGCGGACCG CAAACGTGCT CTACGGCATC
GCGGGGGCGG CCGGCGCCGC GGGCGTCACG CTGTTCTTCG TGGAGGGGAC CTTCTGA
|
|---|
| Protein sequence | MTRPWRLLPL LALVTASAAS IPAAARADDV TEASAHFRKG SALYQQRQWR AAIAEFDAAY
RLKPHGAIHF NVARCREQLQ EWPGALRSYT DYLREVPDAR DRAAVRAAIG RIEARLAAAG
VQALLVYTDP PGAEVRIDGR PRGTTPFHLT LPPGPYTIAL ALEGYAPVEQ AVEVGASASR
VVEVVLQPGS APAPAPPAAP TVRASPPAPG APVAGAAAPQ PGRATALPGA APARPDLSAR
APAAPVPLTP APQARPSRHR VYTWVAAGAA AAALAAGALY GQAAQRKRDA LVDGAPHDDA
SALARDARSK ARTANVLYGI AGAAGAAGVT LFFVEGTF
|
|---|
| |