Gene A2cp1_3705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_3705 
Symbol 
ID7296077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp4125191 
End bp4125820 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content72% 
IMG OID643596515 
ProductLytic transglycosylase catalytic 
Protein accessionYP_002494097 
Protein GI220918793 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTCC GTCCCTACCT CGCCAGGTTC GCCCTGCTGG GCGCCGTCCT GGCGGCTCCG 
GCCGCGCGGG CGAGCGATCT GTATTCGTAC GTCGACTCCG ACGGCGTGGC GCACTTCTCG
AACGCGCCCA GCGATCCGCG CTTCCGCCGC ATCGCGCGGC TGAAGGACGG CGGCGGGGTG
TACCGCGGAG GCAAGGCGCA GGCGCGCGCC CGGCCGCTCC CTCGCTCCGA GGCGCAGGCG
CGGTACCGCG AGCACATCCG GGCCGCCGCG ACGAAGTACA ACCTCCCCGA GGCGCTGCTC
CTCGCGGTGA TGGCGGTCGA GTCGAACTTC GATCACCGGG CCGTCTCGGA GAAGGGCGCC
ATGGGGCTCA TGCAGCTCAT GCCCGGCACC GCCCGCGACA TGTACGTGGG CGACGCGTAC
GAGCCCGCCG AGAACATCGA GGGCGGCGCG CGCTACCTGC GCATCCTCGC GAACCAGTAC
GCCGGCGACA TGGTGAAGAC GCTCGCCGCG TACAACGCCG GGCCCGAGGC GGTCCGGCGC
GCGGGCGACG GCGTGCCGAA CATCCCGGAG ACCCGGGAGT ACGTGCGCAA GGTGGTGGCG
CTGTACGAGG CCTACAAGGC AGGGCGGTGA
 
Protein sequence
MSVRPYLARF ALLGAVLAAP AARASDLYSY VDSDGVAHFS NAPSDPRFRR IARLKDGGGV 
YRGGKAQARA RPLPRSEAQA RYREHIRAAA TKYNLPEALL LAVMAVESNF DHRAVSEKGA
MGLMQLMPGT ARDMYVGDAY EPAENIEGGA RYLRILANQY AGDMVKTLAA YNAGPEAVRR
AGDGVPNIPE TREYVRKVVA LYEAYKAGR