| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3564 |
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| Symbol | |
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| ID | 7299614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | + |
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| Start bp | 3982437 |
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| End bp | 3984350 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 82% |
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| IMG OID | 643596377 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002493960 |
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| Protein GI | 220918656 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0623706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCCG GTGATCGCCT GGCGCTGGAC CGGCTCTGGC CGATGCTGCT CGGGCTCGCC
GCCCTGGTGG CGGGCGCGCT CGCGCTGGAG GCCTGGGCCG GCCGGCGCGG CAACGAGCCG
CTCCGCATCG CGGTGGCCGA CGAGGCGGTC CCCGCCGGCG ACGACGAGGA GCCCTCCGGC
GACGCGCCCG ACGGACCGGA GGCGCCGCCC GTCTCCGAGG CGCACGCCCG CGCCCGCACC
GCGGCGCGCC GCGCGCTCTA CGCGGACGCG ATCCCGCTCT ACGAGCAGGC GCTGCGCGAT
CGCCCCGACG CGCCCGCGCT CGAGGCGGAG CTGGGCGCGT GGCTGCTCGC CGCCGGCCAG
CCCGAGCGCG CGCTGCCGCA CCTCGCCCGC GCCGACCAGC TCCACCCGGA GCCGGCCACG
GCGCTCCGCC TCGGGCTGGC CCGGGCCCGC CTGGGCGATC GCGACGGCGC CGAGCGGGAC
CTCCGCCGCG CGCTGGCCCA GCGGCCCTCG TCGGGCGCGG TCCGCATCGC GCTCGGCACG
CTGCTGCGCC GGCGCGGCGC GATCGCCGAG GCGGTGGCGC TGCTCGAGCC CGCCGCCGCG
GCGGGCTCGA ACGAGGAGCG CGCGCGGGCG CTGGTGGCGC TCGGCGCCGC GCACCTCGCG
GCCGGCCGCC GCGCCGAGGC GGGCCGCGCC TTCGAGCAGG CGGTGCTGTA CGCGCCGGCG
CGGGTCGAGA TCCGCCTGGG CGTGGCCCGC GCCTGGCTCG GCGGCGACGC CGGCGACGCC
GAGCGCGCGC TGTCGGTGCT GGCGCGCGCC GCCGATCTCG CGCCCGACGT GCCGGCGGTG
CACGCCGCGC TCGGGCGCGC CCGCGAGCGC ACCGGCGACG ACGCCGGCGC GGCCGAGGCC
TACGAGCGCG CGCTCCGCCT CGACCCCTCG AACCGCTACG CGCGGCGCCG CGTGCTGCGC
CTCGCGCTCG CGGCCCGCGA CTTCGCGCGG GCCCGGCACG AGGCCGACCG GCTGGTGGCC
GACGGGCCGG AGGTGGCGGA GCACCACTTC CTCGCCGCCC TGGTGGCGGA CCGCGACGGC
CGCCCGGCCG ACGCGCGCCG CGCCTACCGG CGGGCCATCG AGGTCGCGAA GGGCGAGTAC
CCGGAGGCCT GGCTGAACCT GGGCGTGCTG GAGAAGGGCG AGGGCGACCT CGCCGCGGCC
CGCGCCGCGT ACCAGCGGGC GCTGGAGCTG CGGCCCGGCT ACGGCGCCGC GCTCGTCAAC
CTGGGCAAGC TGGAGGAGGC CGCCGGCGAC GCCTCGGCGG CGGAGGCCGC CTACCGGCGG
GCGGTGGAGC TCGATCCGCG GCACGCGCCG GGCTGGCTCG CGCTCGGCCA GCTCCAGTCC
GACGCGCGCC GCCTCGACGA GGCCGTCGCC TCGCTCCGCC GCGCGCTGGA GGCGCGCCCC
GGCTACGACG CCGCCGAGCT GTCGCTGGGC GTCACCGCCG CGCGCGCCGG GCGCACCACC
GAGGCCATCG CCGCCTACCG CCGCGTGCTG GCCCGCTCGC CGCGGTCGGC CACCGCCTGG
TACGACCTCG GCCTGGCGCT GCTCGACGCC GGCGACCCGC GCCAGGCGGG CGACGCGTTC
CGCCAGGCGG CCTCGATCGA CCCGGACCAC GTGCCGTCGC GGCGCAGGAC GGCCGAGCTG
GAGCTCGCCT CCGGGCGCGT CGCCGAGGCC CGGGCCCGCT TCGAGGAGCT GCTCGATCTC
GTCCCCGGCG ACGTCCCGGC GCGCGCCGCG CTCGCCGAGA TCGCCGCCCG CGAGGGCGAC
CGCGCCGGCT GCGAGGCCCG CGCGCGGGCG CTGCTCGCCG AGGCGCCGAA GGATGCCGCC
GTGGCCCCGC TCCTCGCGCG CTGCACCACC CTCGCCCCAC GGGCCGCCCG CTGA
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| Protein sequence | MSPGDRLALD RLWPMLLGLA ALVAGALALE AWAGRRGNEP LRIAVADEAV PAGDDEEPSG
DAPDGPEAPP VSEAHARART AARRALYADA IPLYEQALRD RPDAPALEAE LGAWLLAAGQ
PERALPHLAR ADQLHPEPAT ALRLGLARAR LGDRDGAERD LRRALAQRPS SGAVRIALGT
LLRRRGAIAE AVALLEPAAA AGSNEERARA LVALGAAHLA AGRRAEAGRA FEQAVLYAPA
RVEIRLGVAR AWLGGDAGDA ERALSVLARA ADLAPDVPAV HAALGRARER TGDDAGAAEA
YERALRLDPS NRYARRRVLR LALAARDFAR ARHEADRLVA DGPEVAEHHF LAALVADRDG
RPADARRAYR RAIEVAKGEY PEAWLNLGVL EKGEGDLAAA RAAYQRALEL RPGYGAALVN
LGKLEEAAGD ASAAEAAYRR AVELDPRHAP GWLALGQLQS DARRLDEAVA SLRRALEARP
GYDAAELSLG VTAARAGRTT EAIAAYRRVL ARSPRSATAW YDLGLALLDA GDPRQAGDAF
RQAASIDPDH VPSRRRTAEL ELASGRVAEA RARFEELLDL VPGDVPARAA LAEIAAREGD
RAGCEARARA LLAEAPKDAA VAPLLARCTT LAPRAAR
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