Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3138 |
Symbol | |
ID | 7298134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 3469346 |
End bp | 3470062 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643595948 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002493539 |
Protein GI | 220918235 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00224709 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGGC TCGATCCCGA ACGCTTCCGC GTCCTGTTCG TCGAGGACGA CGAGCGGCTC GCGGCGCTGA CCACCCGCTA CCTCGAGTCG CACGGGCACG CCGTGACCTG GGTGGCCGAC GGGCAGCTCG GGCTGGCCGA GGCGCTGAAG GGCCAGCACG ACGTGGTCAT CCTCGATCTG ATGCTGCCGC GGAAGTCCGG GCTGGAGGTG TGCCGCGAGC TCCGCGCGCG GCTGCCGGTG CCGATCATCA TGCTCACCGC GCTCGGCGAG GAGGCCGACC GCGTGCTCGG CCTGGAGACC GGCGCGGACG ACTACCTCGC GAAGCCGTTC TCGTCGCGCG AGCTGCTGGC CCGCCTGCGC GCGCTGGTCC GGCGCGGCCG CGGGTCGCTC GGGCCGCCGC GGGAGGTGAT CCGCGTGGGC GATCTCGAGC TCTCGCCCCG CGACTGGTCG GCGTCGCGCG CCGGGCGGCC GCTGCGGCTC ACCACCGCCG AGTTCGTGCT GCTGCGCGTC CTGGCGGAGC GCGCCGGCCG CGTGCTCACC CGCGAGCAGC TCCTCGACCT CACCAAGGGC AGCGCCGACG AGGCGTTCGA CCGCTCCATC GACGCCCACA TCTCGCGCCT GCGCCACAAG CTCGGCGACG ACCCTCGCCG GCCCGCGCTC CTCAAGACGG TCCGCGGCGC CGGGTACGTG CTCGCCGCCG GGCCGGAGGG CGCGTGA
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Protein sequence | MTGLDPERFR VLFVEDDERL AALTTRYLES HGHAVTWVAD GQLGLAEALK GQHDVVILDL MLPRKSGLEV CRELRARLPV PIIMLTALGE EADRVLGLET GADDYLAKPF SSRELLARLR ALVRRGRGSL GPPREVIRVG DLELSPRDWS ASRAGRPLRL TTAEFVLLRV LAERAGRVLT REQLLDLTKG SADEAFDRSI DAHISRLRHK LGDDPRRPAL LKTVRGAGYV LAAGPEGA
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