Gene A2cp1_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_3010 
Symbol 
ID7298226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp3334187 
End bp3335152 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content71% 
IMG OID643595820 
Producttype II secretion system protein 
Protein accessionYP_002493411 
Protein GI220918107 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4965] Flp pilus assembly protein TadB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGAGA TGCTCGCCTT CCTCAGCGCC GTCGCCTTCG TCGCCCTCCT CGAGGGCGCG 
CGGCAGCTCT ACCGCTTCAC GGTGGAGAAG AAGAAGGAGG AGCTGAGGCG CCGCCTCCGC
GCGATCGCGG ACCCCGTCGC CGCTGCCGAG GGCACGCTCC TGCGTGCCGG CCGCGTGGCG
CGCAACCCGG CCGTGGCAGC GTTCCTGAAG CGCCTCCCCT TCACAGCCCG GCTGGAGCAG
CTGATCGAGC AGGCCGACTC GCAATTCAGC GTGGCGCAGG TCAGCGCCTG GTCGGCGATG
CTCGCCGCGG CTGGCGCAGT CCTCGCGGGG TGGCTGCGAA TGGGCCTCGG GCTCGGGGGC
CTGCTGTCCG CGGCCGGCCT CGCCCTTCCC ACCCTGCTGC TCGTCGTCGC CCGCGACCGC
AGGAGCAACC GCCTCAGCGA GCAGCTCCCG GAGGCGCTCG ACATGATGGC CCGCTCGCTG
CGCGCGGGGC ACGCGTTCAC CTCCGCCTTC GAAGTGGTGG CCACCGAGAT GCCCGAGCCC
GTGGCGGTCG AGTTCGCCCG TGCGTTCGAG TCGCAGCGCC TCGGGCTCCC GGTGGAGCAG
GCGATCGTGC AGATGACCGA GCGCGCCCCG GGCAACCGGG ACCTCCGCAT CTTCGCGGTC
TCGGCGCTCA TCCAGAAGGA GACCGGCGGC AATCTCGCCG AGATCCTGGG CAGCATCGCA
GAGACGATCC GCGCGCGCTA CCGCTTCTAC AGCAAGCTCA GCGCGCTCAC CGCAGAGGGT
CGCGCTTCCG GGGCCATCCT CGGGATGCTG CCGATCCTGA TGGCGCTGGT GCTTCGCATC
ATGAACCCTG CGTACATGGG CCGCCTCGTC AGCGATCCCC TCGGCCACAT GATCATGCTC
TTCGCCGCCC TGAGCTGGCT GGTCGGCGTG GCATGGCTGT ACTCGCTCAC GAAGGTGGAC
CTGTAG
 
Protein sequence
MREMLAFLSA VAFVALLEGA RQLYRFTVEK KKEELRRRLR AIADPVAAAE GTLLRAGRVA 
RNPAVAAFLK RLPFTARLEQ LIEQADSQFS VAQVSAWSAM LAAAGAVLAG WLRMGLGLGG
LLSAAGLALP TLLLVVARDR RSNRLSEQLP EALDMMARSL RAGHAFTSAF EVVATEMPEP
VAVEFARAFE SQRLGLPVEQ AIVQMTERAP GNRDLRIFAV SALIQKETGG NLAEILGSIA
ETIRARYRFY SKLSALTAEG RASGAILGML PILMALVLRI MNPAYMGRLV SDPLGHMIML
FAALSWLVGV AWLYSLTKVD L