Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3010 |
Symbol | |
ID | 7298226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 3334187 |
End bp | 3335152 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643595820 |
Product | type II secretion system protein |
Protein accession | YP_002493411 |
Protein GI | 220918107 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGAGA TGCTCGCCTT CCTCAGCGCC GTCGCCTTCG TCGCCCTCCT CGAGGGCGCG CGGCAGCTCT ACCGCTTCAC GGTGGAGAAG AAGAAGGAGG AGCTGAGGCG CCGCCTCCGC GCGATCGCGG ACCCCGTCGC CGCTGCCGAG GGCACGCTCC TGCGTGCCGG CCGCGTGGCG CGCAACCCGG CCGTGGCAGC GTTCCTGAAG CGCCTCCCCT TCACAGCCCG GCTGGAGCAG CTGATCGAGC AGGCCGACTC GCAATTCAGC GTGGCGCAGG TCAGCGCCTG GTCGGCGATG CTCGCCGCGG CTGGCGCAGT CCTCGCGGGG TGGCTGCGAA TGGGCCTCGG GCTCGGGGGC CTGCTGTCCG CGGCCGGCCT CGCCCTTCCC ACCCTGCTGC TCGTCGTCGC CCGCGACCGC AGGAGCAACC GCCTCAGCGA GCAGCTCCCG GAGGCGCTCG ACATGATGGC CCGCTCGCTG CGCGCGGGGC ACGCGTTCAC CTCCGCCTTC GAAGTGGTGG CCACCGAGAT GCCCGAGCCC GTGGCGGTCG AGTTCGCCCG TGCGTTCGAG TCGCAGCGCC TCGGGCTCCC GGTGGAGCAG GCGATCGTGC AGATGACCGA GCGCGCCCCG GGCAACCGGG ACCTCCGCAT CTTCGCGGTC TCGGCGCTCA TCCAGAAGGA GACCGGCGGC AATCTCGCCG AGATCCTGGG CAGCATCGCA GAGACGATCC GCGCGCGCTA CCGCTTCTAC AGCAAGCTCA GCGCGCTCAC CGCAGAGGGT CGCGCTTCCG GGGCCATCCT CGGGATGCTG CCGATCCTGA TGGCGCTGGT GCTTCGCATC ATGAACCCTG CGTACATGGG CCGCCTCGTC AGCGATCCCC TCGGCCACAT GATCATGCTC TTCGCCGCCC TGAGCTGGCT GGTCGGCGTG GCATGGCTGT ACTCGCTCAC GAAGGTGGAC CTGTAG
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Protein sequence | MREMLAFLSA VAFVALLEGA RQLYRFTVEK KKEELRRRLR AIADPVAAAE GTLLRAGRVA RNPAVAAFLK RLPFTARLEQ LIEQADSQFS VAQVSAWSAM LAAAGAVLAG WLRMGLGLGG LLSAAGLALP TLLLVVARDR RSNRLSEQLP EALDMMARSL RAGHAFTSAF EVVATEMPEP VAVEFARAFE SQRLGLPVEQ AIVQMTERAP GNRDLRIFAV SALIQKETGG NLAEILGSIA ETIRARYRFY SKLSALTAEG RASGAILGML PILMALVLRI MNPAYMGRLV SDPLGHMIML FAALSWLVGV AWLYSLTKVD L
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