| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3006 |
|---|
| Symbol | |
|---|
| ID | 7298222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 3329321 |
|---|
| End bp | 3330250 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643595816 |
|---|
| Product | Flp pilus assembly protein CpaB |
|---|
| Protein accession | YP_002493407 |
|---|
| Protein GI | 220918103 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3745] Flp pilus assembly protein CpaB |
|---|
| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCC GTCCAGACGA GCAGAGCCCG GCGACCCCCC GCGACAAGCG CAAGCGGCGC
GCAGCCTGGG GCGTCACGTT CCTCGTGGTC GCCATCCTGG CGGCAGTCGG CGTCGCGCTG
CTCCTGACGC GCTACATGGA CGCGCGCGTG GCAGCGGTGC GCGTGCCCAC CTCCGGCGTG
GTGGTTGCCC AGGTCGACAT CCCGGTGGCG ACGCCCATCA AGCCCGAGTG GCTGGGGGTG
GTGCCCTGGC CCGTGACGGC GCTCCCACCG GGCGCTGCGT CGGAGCCCGC GGCGCTGGTC
GGCCAGGTCG CGATCGTTCC GATCACGCGC GGTGAGGCGG TGCTTCCGTC CAAGCTCGCG
ACGGCGGGTG CGCGCAGCGG CCTCGCCACC CTTCTCCCCG CTGGCATGCG CGCGGTCGCG
GTCCGAGTGG ATGACGTCGT CGGCGTGGCG GGCTTCCTCC ACCCCGGCGA TCGCGTGGAC
GTGATCGTGA CCATGCAGCC GCGCGAAGGC GTGCCGTACA CCTCGAAGAT CGTCCTCCAG
AACGTGAAAG TGCTCGCGGT CGGCCAGCAT CTGGAGCTCC GGGGCAAGGA CGCGGAGAAG
CCCAACCCGG TGACGGTCGC GACCCTGATG GTGACGGGCG ACGAGTCCGA GCGGCTGGCG
CTATCCGCGT CGAAGGGCCA GTTGCTGCTG TCCTTGAGGG CGCTCGGGGA CGAGGAGCTC
GTCGACACGA AGGGCATCAC GCCTCCCGTG CTGTTCGCCA GCGCCGCTCA GGAGCCGCGC
GTCGCGGCGA GCGAGCCGGC CAAGCCCCGC ACCCGGGTCG CCGCGCGGCC GGCGCCCGCC
GAGCCGGCGA AGGAGAAGCA GGTGGTCGAG ATCCTCCGCG GCGATCTCTA CGAAAAGCGC
AACTTCGAGG CGAAGGAGAG CCGTCGATGA
|
|---|
| Protein sequence | MSIRPDEQSP ATPRDKRKRR AAWGVTFLVV AILAAVGVAL LLTRYMDARV AAVRVPTSGV
VVAQVDIPVA TPIKPEWLGV VPWPVTALPP GAASEPAALV GQVAIVPITR GEAVLPSKLA
TAGARSGLAT LLPAGMRAVA VRVDDVVGVA GFLHPGDRVD VIVTMQPREG VPYTSKIVLQ
NVKVLAVGQH LELRGKDAEK PNPVTVATLM VTGDESERLA LSASKGQLLL SLRALGDEEL
VDTKGITPPV LFASAAQEPR VAASEPAKPR TRVAARPAPA EPAKEKQVVE ILRGDLYEKR
NFEAKESRR
|
|---|
| |