Gene A2cp1_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_2887 
Symbol 
ID7299818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp3190041 
End bp3191363 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content74% 
IMG OID643595698 
ProductPeptidoglycan-binding LysM 
Protein accessionYP_002493290 
Protein GI220917986 
COG category[S] Function unknown 
COG ID[COG1652] Uncharacterized protein containing LysM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.94359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCA AGCACGTCGT CGCCCTGCTG GCCCTCGTCC CGGCCGCCGC GCTCGCCCAG 
GCCGGCGCGC TCGGCGCGGC CCGCGGCGCC CAGGCCACCT CGGACCAGGG GAACGCGCGC
GTGGAGCAGG CCATCGACGC CGCCACCGGC GCGACCGCCG CGCCGGCCGA CGCGCCGCCC
GCCGGCGATG CCGTGCCGAT CGCGGCCGAG GCCGAGGGCA CCCCGCCCAT CGAGCTCGGC
GCGGCGCCCG AGGCGGTCCC TGCCGCCGGC GGCGCCGGCA CCCCGGAGAC GTACACGGTC
CGCGAGGGCG ACACGCTCTG GGACATCTCC GGGCGCTTCC TCTCCAACCC GTGGTACTGG
CCCAAGATCT GGTCCTACAA CCCGGAGATC ACGAACCCGC ACTGGATCTT CCCGGGCAAC
CTGCTGCGCT TCTACCCGTT CGCCGACGAG GCGCCCGCGC GCGTCGAGGC GGTGGCCGGC
GTGGACGAGG TGGAGGAGGA GCCCGCGCCG GTGCGCGAGC TGGAGGACTT CTCCCGCGCC
GACATGAACG CCCCGGCCTC GGCCGAGGAG CAGGACGCGG TGGCGGTCTC CGGCCCCTAC
AAGATCGGCT TCGTCCCCGC GAAGCAGCGC TACGCGCTGC ACGAGAGCTT CGTGACGCCG
CGCGAGCTGG ACGAGTCCGG CGCCATCGAG GCCGCGTTCG AGGAGAAGCT CATGCTCTCC
GCGCTCGACC GCGGCTACGC GCACTTCAAG CGCGCGGCCG GCGTGAAGCC CGGCGAGACG
TACGTGGTCT ACAAGACCGA GCGGCCGATC CGGCACCCGA TCACGAAGGA GCTGTTCGGC
TACCAGACCC GCATCCTCGG CTCGGCCAAG GTGGTGGCGG TGGACGACAA GGCCGCCACG
CTGGTGATCG CGACCGCGAA CGACGCCATC GAGCGCGGCG CGCTGCTCGC CCCCTGGACC
GACAAGGTGT TCCGCCCGGT GAACCCGCGC GCCAACCAGC GCGCCCTGCA GGGCGTGATC
ATCGCCTCCC CGGTGTCGGT CGTGACCCAG TTCGCCGAGC ACCAGGTGGT GTTCGTGGAC
CGCGGCAGCG CCGACGGCGT CCAGACCGGC AACAGCCTCA AGGTGGTCCG TTCGGGCGAC
CTGTACGGCC TGGAGCCCAA CGCGGTCCCG AACGACCCGG CCCTCCCCCA GGAGGACGTG
GGCGACCTGC TGGTCATCGA CGCGCGCGAG CACGCCTCGG CCGCGCTGGT GACGCGCAGC
CGCGTCGAGC TGCTCGTGGG CGACCGCTTC GAGATGCGGA CCGCGCGCGG GCTTCCCCAG
TAG
 
Protein sequence
MIRKHVVALL ALVPAAALAQ AGALGAARGA QATSDQGNAR VEQAIDAATG ATAAPADAPP 
AGDAVPIAAE AEGTPPIELG AAPEAVPAAG GAGTPETYTV REGDTLWDIS GRFLSNPWYW
PKIWSYNPEI TNPHWIFPGN LLRFYPFADE APARVEAVAG VDEVEEEPAP VRELEDFSRA
DMNAPASAEE QDAVAVSGPY KIGFVPAKQR YALHESFVTP RELDESGAIE AAFEEKLMLS
ALDRGYAHFK RAAGVKPGET YVVYKTERPI RHPITKELFG YQTRILGSAK VVAVDDKAAT
LVIATANDAI ERGALLAPWT DKVFRPVNPR ANQRALQGVI IASPVSVVTQ FAEHQVVFVD
RGSADGVQTG NSLKVVRSGD LYGLEPNAVP NDPALPQEDV GDLLVIDARE HASAALVTRS
RVELLVGDRF EMRTARGLPQ