Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_2887 |
Symbol | |
ID | 7299818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 3190041 |
End bp | 3191363 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643595698 |
Product | Peptidoglycan-binding LysM |
Protein accession | YP_002493290 |
Protein GI | 220917986 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.94359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGCA AGCACGTCGT CGCCCTGCTG GCCCTCGTCC CGGCCGCCGC GCTCGCCCAG GCCGGCGCGC TCGGCGCGGC CCGCGGCGCC CAGGCCACCT CGGACCAGGG GAACGCGCGC GTGGAGCAGG CCATCGACGC CGCCACCGGC GCGACCGCCG CGCCGGCCGA CGCGCCGCCC GCCGGCGATG CCGTGCCGAT CGCGGCCGAG GCCGAGGGCA CCCCGCCCAT CGAGCTCGGC GCGGCGCCCG AGGCGGTCCC TGCCGCCGGC GGCGCCGGCA CCCCGGAGAC GTACACGGTC CGCGAGGGCG ACACGCTCTG GGACATCTCC GGGCGCTTCC TCTCCAACCC GTGGTACTGG CCCAAGATCT GGTCCTACAA CCCGGAGATC ACGAACCCGC ACTGGATCTT CCCGGGCAAC CTGCTGCGCT TCTACCCGTT CGCCGACGAG GCGCCCGCGC GCGTCGAGGC GGTGGCCGGC GTGGACGAGG TGGAGGAGGA GCCCGCGCCG GTGCGCGAGC TGGAGGACTT CTCCCGCGCC GACATGAACG CCCCGGCCTC GGCCGAGGAG CAGGACGCGG TGGCGGTCTC CGGCCCCTAC AAGATCGGCT TCGTCCCCGC GAAGCAGCGC TACGCGCTGC ACGAGAGCTT CGTGACGCCG CGCGAGCTGG ACGAGTCCGG CGCCATCGAG GCCGCGTTCG AGGAGAAGCT CATGCTCTCC GCGCTCGACC GCGGCTACGC GCACTTCAAG CGCGCGGCCG GCGTGAAGCC CGGCGAGACG TACGTGGTCT ACAAGACCGA GCGGCCGATC CGGCACCCGA TCACGAAGGA GCTGTTCGGC TACCAGACCC GCATCCTCGG CTCGGCCAAG GTGGTGGCGG TGGACGACAA GGCCGCCACG CTGGTGATCG CGACCGCGAA CGACGCCATC GAGCGCGGCG CGCTGCTCGC CCCCTGGACC GACAAGGTGT TCCGCCCGGT GAACCCGCGC GCCAACCAGC GCGCCCTGCA GGGCGTGATC ATCGCCTCCC CGGTGTCGGT CGTGACCCAG TTCGCCGAGC ACCAGGTGGT GTTCGTGGAC CGCGGCAGCG CCGACGGCGT CCAGACCGGC AACAGCCTCA AGGTGGTCCG TTCGGGCGAC CTGTACGGCC TGGAGCCCAA CGCGGTCCCG AACGACCCGG CCCTCCCCCA GGAGGACGTG GGCGACCTGC TGGTCATCGA CGCGCGCGAG CACGCCTCGG CCGCGCTGGT GACGCGCAGC CGCGTCGAGC TGCTCGTGGG CGACCGCTTC GAGATGCGGA CCGCGCGCGG GCTTCCCCAG TAG
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Protein sequence | MIRKHVVALL ALVPAAALAQ AGALGAARGA QATSDQGNAR VEQAIDAATG ATAAPADAPP AGDAVPIAAE AEGTPPIELG AAPEAVPAAG GAGTPETYTV REGDTLWDIS GRFLSNPWYW PKIWSYNPEI TNPHWIFPGN LLRFYPFADE APARVEAVAG VDEVEEEPAP VRELEDFSRA DMNAPASAEE QDAVAVSGPY KIGFVPAKQR YALHESFVTP RELDESGAIE AAFEEKLMLS ALDRGYAHFK RAAGVKPGET YVVYKTERPI RHPITKELFG YQTRILGSAK VVAVDDKAAT LVIATANDAI ERGALLAPWT DKVFRPVNPR ANQRALQGVI IASPVSVVTQ FAEHQVVFVD RGSADGVQTG NSLKVVRSGD LYGLEPNAVP NDPALPQEDV GDLLVIDARE HASAALVTRS RVELLVGDRF EMRTARGLPQ
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