Gene A2cp1_2735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_2735 
Symbol 
ID7298802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand+ 
Start bp3017295 
End bp3018263 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content71% 
IMG OID643595538 
ProductRNA polymerase, sigma 32 subunit, RpoH 
Protein accessionYP_002493138 
Protein GI220917834 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGACG AGACGCGTCA CCGCTCCACG AAGGGCCGCC CCGCACTCCC GTCCGCCGGG 
GAGGCGCGCG ACCGCTCCGA GGGCGGGCTG GTCCGCTACG ACCCGCTCCG CGCGTACATG 
GCCGAGGTGG CGCGCCACCC GGTGCTCTCG CGGGACGAGG AGCACGCGCT CGCGGTCCAG 
TACCGCGAGA CCGGCGACGT GGACGCCGCG TACCGGCTGG TCGCGTCCAA TCTGCGACTG 
GTGGTGAAGA TCGCCCACGA GTACCGCCGC ACCGCGTTCC AGCTCCTGGA TCTCGTCCAG 
GAAGGCAACC TCGGGCTCAT GCAGGCGGTG AAGAAGTACG ATCCGTGGAA GGGCGTGAAG 
CTCTCGTCCT ACGCGGCCTG GTGGATCCGC GCGTACATCA TCCGCTTCAT CATGGAGAAC 
TGGCGGCTGG TGAAGCTCGG GACCACCCAG GCGCAGCGCA AGCTGTTCTT CAACCTCTCC 
AAGGAGCGCG AGAAGCTGCT CGCGCGCGGC ATCGAACCGA CGCCGCGGCT GCTCGCGAAG 
AACCTCCAGG TCGAGGAGAA GGACGTGGAG GAGATGAGCG CGCGCATGGC CGCGGACGAC 
CTCTCGCTGG ACGCGCCGGT CGGCACCGAG GGCGACGACG GCCGCCAGAA CCGCCTCGAC 
CGGCTGGCCG ACGACGGCGG CCCGTCGCCC GACGCCGCGC TCGGCGACGA GCAGCTCCGG 
CGGATCTTCC GCGAGAAGCT GGACGCGTTC TCCGGGACGC TCACCGACGA GAAGGAGCGG 
TACATCTTCG AGCACCGCCT CCTCCCGCCC GACGGCACGC CGCCGCTCAC GCTGCAGGAG 
GTGGGCGACC ACTTCCGCCT CACCCGCGAG CGCGCCCGCC AGATCGAGGC CAAGCTGACC 
GGGCGGCTGC GCGAGTTCCT CCGCGCCGAG ATCCCGGACT TCGAGCTGCT CGGGCCGCCC 
GAGACCTGA
 
Protein sequence
MSDETRHRST KGRPALPSAG EARDRSEGGL VRYDPLRAYM AEVARHPVLS RDEEHALAVQ 
YRETGDVDAA YRLVASNLRL VVKIAHEYRR TAFQLLDLVQ EGNLGLMQAV KKYDPWKGVK 
LSSYAAWWIR AYIIRFIMEN WRLVKLGTTQ AQRKLFFNLS KEREKLLARG IEPTPRLLAK 
NLQVEEKDVE EMSARMAADD LSLDAPVGTE GDDGRQNRLD RLADDGGPSP DAALGDEQLR 
RIFREKLDAF SGTLTDEKER YIFEHRLLPP DGTPPLTLQE VGDHFRLTRE RARQIEAKLT 
GRLREFLRAE IPDFELLGPP ET