Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_2460 |
Symbol | |
ID | 7296943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 2717077 |
End bp | 2718984 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643595263 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_002492864 |
Protein GI | 220917560 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCGACAGT CCTACAAGAC CGCCCTGCTC TGGGTCTTCC TGATCGTGAT GTTCATCGCG CTCTGGAAGC TGTTCGAGCA GCGGGGGCGC GAAGCGAAGT CCTACAACTG GTCGCAGTTC ATGGCCAAGG TCGAGTCGGG CGAGGTGAAG GAGGTCACGG TCAAGGACCT CGACTACTTC GGCCACCTGC GCGACGGCTC CGACTTCGTG ACCACCGGGC CCATCGACGC CTCCGCGACC ATCGCCGAGA AGCTCCGGGA GAAGGGCGTC AACCTGACGT ACCAGAAGCC CGAGCAGAAC TCGCTCTGGG TGACGGTGGT GCTGCAGTAC CTGCCGCTCG TGTTCGTGTT CCTGCTCATC TTCTTCTTCA TGCGCCAGCT GCAATCCGGC GGCGGGAAGG CGATGAGCTT CGGGAAGTCG CGCGCGAAGC TGATGACCGA GCACCACAAC AAGATCACGT TCGCCGACGT GGCCGGCATC GACGAGTCGC GCGACGAGCT CGAGGAGATC ATCTCCTTCC TGAAGGACCC GAAGAAGTTC ACGCGCCTCG GCGGCCGCAT CCCGAAGGGC GTGCTGCTGA TGGGCCCGCC GGGCACCGGC AAGACGCTGC TGGCGCGCGC CGTGGCCGGC GAGGCCGGCG TCCCGTTCTT CTCCATCTCC GGCTCGGACT TCGTGGAGAT GTTCGTGGGC GTCGGCGCGA GCCGCGTGCG CGACCTGTTC GAGCAGGGCA AGAAGAACGC GCCCTGCATC ATCTTCATCG ACGAGATCGA CGCCGTCGGC CGCCACCGCG GCGCCGGCCT GGGCGGCGGC CACGACGAGC GCGAGCAGAC GCTGAACCAG CTGCTGGTGG AGATGGACGG CTTCGAGTCG AACGAGGGCG TCATCCTCAT CGCCGCCACC AACCGGCCCG ACGTGCTCGA CCCGGCGCTG CTGCGCCCGG GCCGCTTCGA CCGCCGCATC GTGGTGCCGC GCCCCGACCT GAACGGCCGC CTCGGCATCC TCAAGGTGCA CACCAAGAAG ACCCCGCTCG ACACGCAGGT GGACCTCACG CAGATCGCGC GCGGGACGCC CGGCTTCTCC GGCGCCGACA TCGAGAACCT CGTGAACGAG GCGGCGCTCT ACGCCGCGCG GCGCAACAAG GAGAAGCTCG CCATCGAGGA CTTCGAGTTC GCGAAGGACA AGGTGATCAT GGGCACCGAG CGGCGCTCGA TGATCATCTC CGAGAAGGAG AAGCGCACCA CCGCGATCCA CGAGGCCGGG CACGCGCTGG TCGCGAAGAT CCTCCCGGGC ACCGACCCGG TGCACAAGGT GACCATCATC CCTCGCGGCC GCGCGCTGGG CCTGACCCAG CAGCTCCCGC AGGAGGATCG GCTCAACCTG AACCAGGAGT TCGCGCTGAA CCAGGTGGCC ATCCTGATGG GCGGCCGCCT CGCCGAGGAG ATCACCTTCG GCCAGAAGAC CACCGGCGCC GGGAACGACA TCGAGGTCGC GACCAACCTG GCCCGCTCCA TGGTGTGCGA GTGGGGCATG AGCGAGAAGA TGGGCCCGCT CGCCTTCGGC AAGAAGGAGG GCGAGGTCTT CCTCGGCCGC GAGATGGCGA CCGCGCACAC GTACTCCGAG CAGACCGCGC GCGACATCGA CGCCGAGGTG CACCGGATCG TCACCGAGCA GTACGATCGG GCGAAGAAGG TCCTGCTCGA GAACCAGCCG CTGCTGAACG CCATCGCCGA CGCGCTCATC GAGTACGAGA CGCTCGACGC GGCCGACATC GACGTGCTGC TCGGCGGCGG CACCATCAGC CGGCCCCCGC CGGCGAAGCC CATGGTGCCG ACGCCGGCCG AGAAGGGCGG CAAGCGCGGC GGGCTGCTCG ACGCGGTGGG CGGCGTCCCG GCGGCGGGCA AGGCCTGA
|
Protein sequence | MRQSYKTALL WVFLIVMFIA LWKLFEQRGR EAKSYNWSQF MAKVESGEVK EVTVKDLDYF GHLRDGSDFV TTGPIDASAT IAEKLREKGV NLTYQKPEQN SLWVTVVLQY LPLVFVFLLI FFFMRQLQSG GGKAMSFGKS RAKLMTEHHN KITFADVAGI DESRDELEEI ISFLKDPKKF TRLGGRIPKG VLLMGPPGTG KTLLARAVAG EAGVPFFSIS GSDFVEMFVG VGASRVRDLF EQGKKNAPCI IFIDEIDAVG RHRGAGLGGG HDEREQTLNQ LLVEMDGFES NEGVILIAAT NRPDVLDPAL LRPGRFDRRI VVPRPDLNGR LGILKVHTKK TPLDTQVDLT QIARGTPGFS GADIENLVNE AALYAARRNK EKLAIEDFEF AKDKVIMGTE RRSMIISEKE KRTTAIHEAG HALVAKILPG TDPVHKVTII PRGRALGLTQ QLPQEDRLNL NQEFALNQVA ILMGGRLAEE ITFGQKTTGA GNDIEVATNL ARSMVCEWGM SEKMGPLAFG KKEGEVFLGR EMATAHTYSE QTARDIDAEV HRIVTEQYDR AKKVLLENQP LLNAIADALI EYETLDAADI DVLLGGGTIS RPPPAKPMVP TPAEKGGKRG GLLDAVGGVP AAGKA
|
| |