| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2250 |
|---|
| Symbol | |
|---|
| ID | 7299216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 2497896 |
|---|
| End bp | 2498561 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643595046 |
|---|
| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
|---|
| Protein accession | YP_002492654 |
|---|
| Protein GI | 220917350 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0491464 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCC AGAAGCGCGT GGGCGTCGTC CTGTCCGGCT GCGGGTTCCT GGACGGCGCC
GAGATCCACG AGGCGGTGTG CACGCTGCTG TCCCTCGACC GCCGCGGCGT GAAGCTCGTC
GCGACCGCGC CGGACGTCGA GCAGCTGCAC GTCGTCGATC ACGTGAAGGG GGCGCCGGCC
GACGGCGAGC GGCGCCGCGT GCTGGTGGAG GCGGCCCGCA TCGTGCGCGG GCAGATCACG
CCGCTCTCCG CGGTGTCGGG GCGGGACCTC GACGCGCTGG TGTTCCCGGG CGGCTTCGGC
GCGGCCAAGA ACCTCTGCAG CTTCGCGGTG GAGGGCCGGG CCATGCGCGT CCTCCCGGAG
GTGGAGCGGA TCGTGCGCGA GGTGCGCGGC GCCGGCAGGC CGATGGGCTT CATCTGCATC
GCCCCGGTGA TCGCGGCGCG CCTGCTCGGG CCCGAGGGGG TCAAGGTCAC GATCGGGAAC
GACCGCGACA CCGCCGCCGC GATCGAGTCC TGGGGCGCGC GCCACGTGGA CTGCAAGGTG
GAGGACGCGG TGGTGGACGA GCGGCTGAAG ATCGCCAGCA CGCCCGCCTA CATGCTCGGC
CCCTGGATCG CCCCGGTGGC GACCGGGATC GACAAGCTGG TCTCGGCGGT GCTGGAGATG
GCCTGA
|
|---|
| Protein sequence | MASQKRVGVV LSGCGFLDGA EIHEAVCTLL SLDRRGVKLV ATAPDVEQLH VVDHVKGAPA
DGERRRVLVE AARIVRGQIT PLSAVSGRDL DALVFPGGFG AAKNLCSFAV EGRAMRVLPE
VERIVREVRG AGRPMGFICI APVIAARLLG PEGVKVTIGN DRDTAAAIES WGARHVDCKV
EDAVVDERLK IASTPAYMLG PWIAPVATGI DKLVSAVLEM A
|
|---|
| |