| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2116 |
|---|
| Symbol | |
|---|
| ID | 7296009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 2363594 |
|---|
| End bp | 2365120 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643594912 |
|---|
| Product | histidine ammonia-lyase |
|---|
| Protein accession | YP_002492522 |
|---|
| Protein GI | 220917218 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2986] Histidine ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00707629 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCC TCCTCCTCGA CGGCGAGACC CTCACGCTGG AGCAGGTCCG TGCGGTCGCG
ACCGGGGCCG CCCGCGCCGC GCTCGCCCCC GCGGCCCGCG AGCGCGTGCG GCGTTCCCGC
GCGCTGGTGG ACGCCCGGCT CGAGGACGGC GAGGCGCACT ACGGCATCAA CACCGGCTTC
GGGACGCTCG CCGAGGTCCG CATCCCGCGG GCCGACCTCG AGCGGCTGCA GCGCAACCTG
GTGCTCTCGC ACGCCGCCGG CGTGGGCGCG CCGCTGCCCC TCCCGGAGGC GCGCGCGCTG
GTGCTGCTGC GCGCCAACGT GCTCGCGAAG GGCGTCTCCG GGATCCGCGA GCACACGCTG
GACCTGCTGC TCGCCATGCT GGAGCGCGGC GTGGTGCCGG TGGTGCCGGA GCGCGGGTCG
GTGGGCGCGT CGGGCGACCT CGCCCCGCTC GCGCACCTGG CGCTGGTGCT GATCGGCGAC
GGCGAGGCGT TCCTCGCGCC GCCCGGCGCG GCGGGCCGGC CCGAGCGGCT CCCCGGCGGC
GAGGCGCTGC GGCGCGCCGG GCTCGAGCCG GTCGTGCTGC AGCCGAAGGA GGGGCTGGCG
CTGGTGAACG GCACCCAGGC CATGGCCGCG GTCGGCACGC TCGCGCTGCT CCGCGCGGAG
CGGCTGGCGG CGCTCGCCGA TCTCGCCGGC GCCATGACGC TGGAGGGCCT GCTCGGCTCG
CACCGGCCGT TCGCGCCGGA GATCCAGGCC GCCCGCGGGC AGCCCGGCCA GATCGCCGCG
GCGGCGCACC TGCGCGCGCT GCTGGCCGGC TCCGAGCTGA ACGCCTCGCA CCAGGGCCCG
GGCTGCCACA AGGTGCAGGA CCCCTACTCG CTCCGCTGCA TGCCGCAGGT GCACGGCGCC
GCGCGCGACG GCATCGACTT CTGCCGCGGC GTGCTGGCGC GCGAGGTGAA CGCCGCCACG
GACAACCCGC TGGTCTTCCC GGACACCGGG GAGATCGTCT CGGGCGGCAA CTTCCACGGC
CAGCCGGTGG CGCTCGCGCT CGACGTGCTC GCGGTGGCCG CCTCGCACCT CGCCGCGATC
TCGGAGCGCC GCGTGGAGCA GCTCGTGAAC CCGTCGCTGT CCGGGCTCCC GCCGTTCCTG
GCGCCCCAGC ACGGGCTGAA CTCGGGGTTC ATGATCGCGC AGGTGACCAG CGCGGCGCTC
GTCTCGGAGA ACAAGGTGCT CTGCCACCCG GCCTCGGTGG ACTCGATCCC GTCCTCCGCC
GGCCGCGAGG ACCACGTGTC GATGGGCATG ACCGCGGCGC TCAAGGCGCG CCAGGTGGTG
GAGAACGTCC GCACCTGCCT CGCCATCGAG CTGCTGGTCG CGGCCCAGGC GCTCGATCTC
CGCGCCCCGC TCCGGCCCGC GCAGCGCGTG GCCGAGGCGC ACGCGCGCCT GCGCGAGCGC
GTCCCGCACC TGTCCGAGGA CCGCGCGCTG CACCGCGACA TCGAGGCGGT GTCGCGGCTC
GTGGACGAGG GCGCGCTGGA GCCGTGA
|
|---|
| Protein sequence | METLLLDGET LTLEQVRAVA TGAARAALAP AARERVRRSR ALVDARLEDG EAHYGINTGF
GTLAEVRIPR ADLERLQRNL VLSHAAGVGA PLPLPEARAL VLLRANVLAK GVSGIREHTL
DLLLAMLERG VVPVVPERGS VGASGDLAPL AHLALVLIGD GEAFLAPPGA AGRPERLPGG
EALRRAGLEP VVLQPKEGLA LVNGTQAMAA VGTLALLRAE RLAALADLAG AMTLEGLLGS
HRPFAPEIQA ARGQPGQIAA AAHLRALLAG SELNASHQGP GCHKVQDPYS LRCMPQVHGA
ARDGIDFCRG VLAREVNAAT DNPLVFPDTG EIVSGGNFHG QPVALALDVL AVAASHLAAI
SERRVEQLVN PSLSGLPPFL APQHGLNSGF MIAQVTSAAL VSENKVLCHP ASVDSIPSSA
GREDHVSMGM TAALKARQVV ENVRTCLAIE LLVAAQALDL RAPLRPAQRV AEAHARLRER
VPHLSEDRAL HRDIEAVSRL VDEGALEP
|
|---|
| |