| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2011 |
|---|
| Symbol | |
|---|
| ID | 7300138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 2264853 |
|---|
| End bp | 2265776 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 643594806 |
|---|
| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| Protein accession | YP_002492418 |
|---|
| Protein GI | 220917114 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCCC CCCGGAGCCG CCGGCGCGTC CCGCGCGCCC TCCTCTTCGC CGCCGCCGCG
GTCGCGATCG CGGTCGCGGG GCTCACGCTC CTCTGGGCCG CCCTCCCCGA CCCCGCCCCG
CTCGCCCGCG ACAACCCGCG CACCACCGCG CTCATCGAGC AGCGGCGCGC CGAGGCGAAG
GAGAAGCGGC GCGCGTTCCG GCCGCGCCAG GCCTGGGTGC CGCTCGACCG CGTCTCGCGC
TCCATGGTCC AGGCGGTGCT GCTCTCCGAG GACGCCAACT TCTACGGCCA CGAGGGCATC
GACTGGGAGG CCACCCGCGA CGCCGCCGCG CACGACCTCG AGCAGCGCAG CTTCGCCCGC
GGCGCGTCCA CCATCACGCA GCAGCTCGCC AAGAACCTGT GGCTGGGCAC CGAGAAGAGC
CTGTGGCGCA AGCTCAAGGA GGCGCTGCTG GCCGTGAAGC TGGAGCGCGA GCTCCCCAAG
CGCCGCATCC TCGGGCTCTA CCTGAACGTG GTCGAGCTGG GCGACGGCGT CTTCGGCGTG
GAGGCGGGCG CGCGGGCGCG CTTCGGCACC AGCGCCGCGG CGCTCACCCC GGCGCAGGCG
GCCGTGCTCG CCAGCATGCT GCCGGCGCCG CGCCGGGTGG ACCTCTCCAG CCCGTCCACG
TGGCTGAAGC GCCGCTCGCG GCGGCTGCTC GACCGGATGC GCGCGGCCGG CCGGCTCACC
GCCGAGCAGC ACCTGTCGGC GAGCGCCGAG CTGGAGCGGA TCCTGGCCGG CCCGGCGCCG
CGCGACGACC GCGAGGAGCC GCCGGACGTC GTGGACGACG TGCCGGTCGC GGCGGTGCCG
CGGGCGGAGC CGGTGCCCGC GGCCGCGGCG GCGGCCCCGG AGCCCGCGGC CGCAGAGGCG
GCCGGCCCCG GCGAGCCGCG CTAG
|
|---|
| Protein sequence | MPAPRSRRRV PRALLFAAAA VAIAVAGLTL LWAALPDPAP LARDNPRTTA LIEQRRAEAK
EKRRAFRPRQ AWVPLDRVSR SMVQAVLLSE DANFYGHEGI DWEATRDAAA HDLEQRSFAR
GASTITQQLA KNLWLGTEKS LWRKLKEALL AVKLERELPK RRILGLYLNV VELGDGVFGV
EAGARARFGT SAAALTPAQA AVLASMLPAP RRVDLSSPST WLKRRSRRLL DRMRAAGRLT
AEQHLSASAE LERILAGPAP RDDREEPPDV VDDVPVAAVP RAEPVPAAAA AAPEPAAAEA
AGPGEPR
|
|---|
| |