| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1891 |
|---|
| Symbol | |
|---|
| ID | 7296417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 2123264 |
|---|
| End bp | 2123878 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643594686 |
|---|
| Product | membrane lipoprotein lipid attachment site |
|---|
| Protein accession | YP_002492299 |
|---|
| Protein GI | 220916995 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
|---|
| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCG CCAGCTCCCG CGCCCTGCCC CGCACGCTCC CGCTGCTCAC CGCCGCCGCG
CTCGTCGCCG CCTGCGGCCC GCGAGCCTTC ACCCGCGGTG CCTACGAGGA CCCGAACACC
ATCGAGCTGC TCTCCGACCA GTTCAACGAG AACGACCTGC AGCTCATCGC CAAGAAGATG
ACCGGCTCGC TGCTCGGCGC GCCCGTGGTG CAGGCGCTGC CGGGCCGGCC GGTGCTGGTG
GTGGGCCGCG TCCGGAACAA GACCTCCGAG CACATCGACA CCGAGTCGCT CGCGGACAAG
GTCCGGGTCG AGCTGCAGCG GTCCGGCCGG TTCGCGTTCG CCGACGCGGC GGCCCGCGAG
CAGATCGCCG CCGAGTACGA CTACCAGCAG TCCGGCATGG TCGCGAAGGA GACCGCCAAG
GGCCCGGGCG CGCAGGTCGG CGCCGACTGC GTCCTGACCG GGCAGATCGC GTCGATCGTG
CAGGAGGTCG GCGCGGACAA GGTCGTCTAC TACAAGATGA CCATGCAGCT CACCGACCTC
CGGACCGGCC TCATCACCTG GACCGACGAG AAGGAGCTGC GGAAGAAGTT CCGGAAGCAG
TCGGTGGGCT GGTAG
|
|---|
| Protein sequence | MPRASSRALP RTLPLLTAAA LVAACGPRAF TRGAYEDPNT IELLSDQFNE NDLQLIAKKM
TGSLLGAPVV QALPGRPVLV VGRVRNKTSE HIDTESLADK VRVELQRSGR FAFADAAARE
QIAAEYDYQQ SGMVAKETAK GPGAQVGADC VLTGQIASIV QEVGADKVVY YKMTMQLTDL
RTGLITWTDE KELRKKFRKQ SVGW
|
|---|
| |