Gene A2cp1_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_1696 
Symbol 
ID7298667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand- 
Start bp1889507 
End bp1890490 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content75% 
IMG OID643594492 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002492105 
Protein GI220916801 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.195925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGC CTCCAGAGCC GACCCCTTCC CTCGCCGGCG CCGTCCAGGC GTCCTGGCAC 
CGCTTCCTCG ACACCTACGA GCCGCTGCGC CCGGAGCTGT ACCGGTACTG CCGCAGCCTG 
GCGCGCAGCC CCTGGGACGC GGACGACCTG GTGCAGGACG CGATGGCGCG GGCGTTCGTG 
ACGCTCGGCT GCATGGACGG CCCGCCGGAG AACCCGCGGG CCTGGCTGTT CCGGGTGGCG 
TCGAACCTGT GGATCGACCG GCTCCGGCGG ACGCGCGAGG ACGCCGGGGA CGTGCCGGAG 
GGCGCGACCG CGCCCGAGCC GAGGGCGTCG CGCGAGGCGG CCGGCACGCT CATCGGCCGG 
CTGTCGCCAC AGGAGCGCGC CGCGGTGGTG CTGAAGGAGG CGTTCGACCT CTCGCTCGAG 
GAGATCGCCG AGGCGCTCGC CACCAGCGTC GGGGCGGTGA AGGCGGCGCT CCACCGCGGC 
CGCGGGAAGC TGGCCGGGCC GGACGAGGCG GTCACGGCGT CCCCGAGCGC GCCGGTGCTC 
GACGCGTTCT GCGCGGCGTT CAACGCCGGG GACCTCGAGC GGCTGGTGGC GCTCCTGCTC 
GACACCGCCA GCGTGGAGGT GGTGCGCGTG CACGCCGAGT ACGGCCGCGA CGCCGCGCGC 
AAGGGCGTGT TCCAGGGCAT GATGTACGGC AGCCGGCGGC TGGCCGGCGT GGACGGCCAG 
ACCACCGGCA TCGACCCGCG CTACCGCCTC GGCGCCCTCC CCGACCGCCC CCGCTGCGAG 
GTGCGGCTGC ACCGGGGCGA GCCGGTCATC GTGCACTGGT ACGCGCACGC CGACGGCGAG 
GCGGTCCGCG CGCTCACCCG GCTCGAGACC TCGGGCGACC GGCTCTCGCG TGTGCGCAAC 
TACTTCTACA CGCCGGGCGT CATCGCCGAG GTGTGCGGCG AGCTCGGCCT CCCCTACCGC 
ATCAACGGCT ACCGCTACTG GTGA
 
Protein sequence
MTTPPEPTPS LAGAVQASWH RFLDTYEPLR PELYRYCRSL ARSPWDADDL VQDAMARAFV 
TLGCMDGPPE NPRAWLFRVA SNLWIDRLRR TREDAGDVPE GATAPEPRAS REAAGTLIGR 
LSPQERAAVV LKEAFDLSLE EIAEALATSV GAVKAALHRG RGKLAGPDEA VTASPSAPVL 
DAFCAAFNAG DLERLVALLL DTASVEVVRV HAEYGRDAAR KGVFQGMMYG SRRLAGVDGQ 
TTGIDPRYRL GALPDRPRCE VRLHRGEPVI VHWYAHADGE AVRALTRLET SGDRLSRVRN 
YFYTPGVIAE VCGELGLPYR INGYRYW