| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1566 |
|---|
| Symbol | |
|---|
| ID | 7296324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 1751094 |
|---|
| End bp | 1752461 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643594362 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_002491976 |
|---|
| Protein GI | 220916672 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.355183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTACT CGGTCCTCCT CGTGGACGAC GAGCGCTTCG CGCGCACCGT GTACTCGGAC
TACCTGCGCG CCGCGGGGTA CGAGGTCGAG CTCGCGGAGG ACGCGGAGGC GGCGCTCGCG
CTCCTGCGCC AGCGGCGCTT CGACGTGCTG CTCACCGACG TGATCCTCCC GGGCTCGTCC
GGCCTCGACC TGCTCTCGGC CGCGAAGCAG CTCGACCCGA ACCTCGAGGT CACGGTCATC
ACCGCGCTCG ACAAGGTGGA CCCGGCCGTG CGCGCCATGA AGTCCGGCGC CTCGGACTAC
CTGGTGAAGC CGGTGACGCC GGAGCAGCTC CAGCTCGCGC TGCAGCGCTG CCTCGCCACC
CGCGAGCTGC TCGCCGAGAA CAAGGTGCTG CGCGCGCACC TCACGCTGTT CGAGACCGGC
CAGCGCATCG CCGCCACGCT CGATCGCGAC AAGCTGGTGC CGATGGCCCT CGCCTCGGTC
GCGACGGCGG CGCGCAGCCC GGTCGCGGCG CTCATGGAGA AGGCGGCGGA CGGGAGCTGG
GTGCCCTCCG GCGCGCACGG GACCGATCAC GCGGTCGCGA CCGAGCTGCT CGCCGCCTGC
CGCGCGGAGC TCGATGCGCT GGGGGCCGAG CCGACCGCCC GGGGCGAGCA TGCGCCGGGC
GAGCTGGGGC CGTTCGGGCC GCGCGCGCTG CTCCTGCCGG TCACCGAGGA GGGCGCGCTG
CTCGGGGCCG TGGCGGTGAA CGCGCCGGGC CCGCTCGAGC CGGCCGGCGC CGAGGCGGTG
GGGTACCTCT GCCGCAACCT GGGGCTCGCG CTCCGCAACC TCGGCCGGCT GAGGCAGGTC
GAGCACCTCG CCTACCTCGA CGACCTCACG CACCTCTACA ACACCCGCTA CCTGGACATG
GCGCTCGACC GCGAGATGCA GAGCGGCCGC CCGTTCTCGG TCCTGTTCAT GGACCTCGAC
CACTTCAAGA CCGTCAACGA CCAGCACGGC CACCTGTCCG GCTCGCGCCT GCTGGTCGAG
GTGGCGCGGG TGCTCCGCTC CTGCGTCCGC GACGAGGACG TCCTGGTCCG TTACGGGGGG
GACGAGTACG TGGTGCTGCT GGTCGGGATC GACTCCGGCG GCGGGCTGAA GGTGGCCGAG
CGGGTCCGCC GGGCCATCGA GGACCACCGG TTCCTGTCAC GGGAGGGCGC CCGGGTGCGG
GTCACGGCGT CCATCGGGCT CGCGAGCTAC CCCGAGCACG CCCAGGAGAA GAGCGAGATC
CTCGACCTCG CCGACCGCGC CATGTACCGG GGCAAGCGCT CCAGCCGGAA CGTGGTCTAC
ATGGCGTCGA AGGACCTGCC GCCGATTCCG GCCGGCGAGA GGCCGTAA
|
|---|
| Protein sequence | MAYSVLLVDD ERFARTVYSD YLRAAGYEVE LAEDAEAALA LLRQRRFDVL LTDVILPGSS
GLDLLSAAKQ LDPNLEVTVI TALDKVDPAV RAMKSGASDY LVKPVTPEQL QLALQRCLAT
RELLAENKVL RAHLTLFETG QRIAATLDRD KLVPMALASV ATAARSPVAA LMEKAADGSW
VPSGAHGTDH AVATELLAAC RAELDALGAE PTARGEHAPG ELGPFGPRAL LLPVTEEGAL
LGAVAVNAPG PLEPAGAEAV GYLCRNLGLA LRNLGRLRQV EHLAYLDDLT HLYNTRYLDM
ALDREMQSGR PFSVLFMDLD HFKTVNDQHG HLSGSRLLVE VARVLRSCVR DEDVLVRYGG
DEYVVLLVGI DSGGGLKVAE RVRRAIEDHR FLSREGARVR VTASIGLASY PEHAQEKSEI
LDLADRAMYR GKRSSRNVVY MASKDLPPIP AGERP
|
|---|
| |