Gene A2cp1_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_1410 
Symbol 
ID7299931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp1575253 
End bp1577094 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content70% 
IMG OID643594205 
Productprotein-export membrane protein SecD 
Protein accessionYP_002491820 
Protein GI220916516 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0342] Preprotein translocase subunit SecD 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.447303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGCT CCTGGTACTG GCGCGTCGCG CTCGTCGTGG CGGTCGCGAT CCTGTCGATC 
TACCAGCTCG TCCCGAGCTG GTTCTACTTC AAGCTCCCGC CCGACCAGCG GAACACCGAG
GCGTACGACA CCTCGGTGCC GGGCTGGGCG CCGGACGCGA AGCACCACCT CAACCTCGGC
CTGGACCTCC AGGGCGGCAT CCTGCTCTCC ATGGGCGTGG ACGTCGACCG GGCGGTGAAG
ACCAAGGTCG CCCGCCGCGC CGACGAGATC GGCGAGTTCC TGAAGGGCAA GAACGTCGCG
TTCACCGGCA CGCAGGTGGT CGGCGGCGGC GCGCAAGTCG AGGTGGCCGC CGCGAACCCG
GGCGAGGTGA AGGACGCGGT GCTCGGCTCC TCCGGCTACG CGGAGGAGAT GTACTCGCCG
GGCGGCGCGC CGGAGGGCGC GGTCCGCTTC GCGTTCAAGG ACTCGGTGCT CCGCGACTTC
CGCGAGAAGG CGGTGAAGCA GGCGGAGAAG GTCATCCGCA ACCGCGTGGA CAAGTGGGGC
GTCACCGAGC CCGACATCAA GACCAAGGCG AACAACCAGA TCCAGGTCCA GCTCCCGGGC
TTCAAGGATC CGGAGAAGGC CAAGGAGCTG CTGGGCCGCA CCGCGCAGCT CGAGTTCAAG
ATCGCCGACG ACGAGAACCC GGCGCTCGAC CCGGTCCGCG GGCAGCTCCC GCAGTGCCAG
GGCGACCGCC AGGGCCTGTC CCTGCCGCTC CCCGAGACCG GCTGCTGGAC GGTGGAGCCG
GTCGAGCTGC CGAACGGCGG CACGCGCGCG GCCACCATGG TCGCGGCGAA CACCCGCACC
GAGCTGGAGA AGGTCATCGC GGAGAAGCTG AACCCGCTGC TCGACCCGCA GAAGAACGCG
GTCGGCATCG GCGAGGGCCA GGTCGGCCAG GGCCCCATCA AGACCACCTA CTACCGGACC
TACCTGCTCC GCGCGAAGAC CGAGCTGACC GGCGACTACA TCGCCGACGC GGCGGTGGCC
GTGGACCAGT CCGACACGCT CCAGCGCGGG CGCCCGGTGG TCTCCTTCAA GATGTCGCCC
GAGGGGGCGC GCCTGATGGA GAAGCTCACC ACCGAGAACA TGCGGCGCCG GATGGCGACG
GTGCTCGACG ACAAGGTCGA GACCGCGCCG TACATCCAGG GCCGCATCTC CTCCAACGGC
CAGATCACGC TCGGCTCGGG CCGCAACCAG CAGGACATGT TCGACGAGGC GAACGGCATC
GCGCTGGTGC TGAAGGCTGG CGCGCTCCCC GCGCCGGTGA CCATCACCGA GGAGCGCACC
GTGGGCGCCA CCCTCGGGCC GGAGCTGGTG CGCAAGGGCA CGCTCGCGGC GCTGGTCGGC
CTCGCGCTGG TGGTGGTGTT CATGGTCGTC TACTACCGCG GCACCGGCCT GGTGGCGGAC
GTGGCGCTGG CGCTGAACGG CCTGCTGGTG CTGGCGGTCA TGTCGATGAT CGGCACCACG
CTGACGCTGC CGGGCATCGC CGGGTTCGTG CTCACGCTCG GCATGGCGGT GGACGCGAAC
GTGCTCATCA ACGAGCGCAT CCGCGAGGAG ATGCGCGCCG GGCGCAACGT GCGGCAGTCG
GTGCAGCTCG GCTACGACCG CGTGTTCTGG ACCATCGTGG ACTCGCACGT GACCACGCTG
GTCGCCGGCG TGGTGCTGTT CCAGTACGGG TCGGGGCCGA TCCGCGGCTT CGCGGTGACG
CTGATCATCG GCCTGGTCGC CTCGATGTTC ACGTCGATCG TGGTGACCCG GGTGATCATG
GAGTACTTCA CGCGCCACGA CACGGCGCGC CTGAGCGTCT GA
 
Protein sequence
MERSWYWRVA LVVAVAILSI YQLVPSWFYF KLPPDQRNTE AYDTSVPGWA PDAKHHLNLG 
LDLQGGILLS MGVDVDRAVK TKVARRADEI GEFLKGKNVA FTGTQVVGGG AQVEVAAANP
GEVKDAVLGS SGYAEEMYSP GGAPEGAVRF AFKDSVLRDF REKAVKQAEK VIRNRVDKWG
VTEPDIKTKA NNQIQVQLPG FKDPEKAKEL LGRTAQLEFK IADDENPALD PVRGQLPQCQ
GDRQGLSLPL PETGCWTVEP VELPNGGTRA ATMVAANTRT ELEKVIAEKL NPLLDPQKNA
VGIGEGQVGQ GPIKTTYYRT YLLRAKTELT GDYIADAAVA VDQSDTLQRG RPVVSFKMSP
EGARLMEKLT TENMRRRMAT VLDDKVETAP YIQGRISSNG QITLGSGRNQ QDMFDEANGI
ALVLKAGALP APVTITEERT VGATLGPELV RKGTLAALVG LALVVVFMVV YYRGTGLVAD
VALALNGLLV LAVMSMIGTT LTLPGIAGFV LTLGMAVDAN VLINERIREE MRAGRNVRQS
VQLGYDRVFW TIVDSHVTTL VAGVVLFQYG SGPIRGFAVT LIIGLVASMF TSIVVTRVIM
EYFTRHDTAR LSV