Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_1235 |
Symbol | |
ID | 7299101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 1385570 |
End bp | 1387735 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643594022 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_002491645 |
Protein GI | 220916341 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.434132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCCA TCCAGAAGAC CGCCACGGTC GGCGGCAAGG ACATCCTGCT CGAGACCGGC AAGGTCGCGA AGCAGGCGCA CGGCTCGGTC TGGGTCCGCC TCGGCGACTC GATCGTGCTC GTCACCGCGG TGTCCGCCGC GGAGAAGAAG GAAGGCATCG ACTTCTTCCC GCTGACGGTG GACTACCAGG AGAAGCTGTT CGCCGCGGGC CGTGTCCCCG GCAGCTTCTT CCGCCGCGAG GGCCGCCCCA CCGAGAAGGA GACGCTGACC TCGCGTCTGG TGGACCGGTC CTGCCGGCCG CTGTTCGCCG AGGGCTACTC CAACGAGACG CAGGTCATCG CGACCGTCAT CTCCTTCGAC CAGGAGAACG ACACCGACGT GCTCGCGCTC ACCGGCGCGT CCGCGGCGCT CCACATCTCG GACATCCCGT TCGGCGGCCC GATCGCCGGC GTCCGCGTCG CCCGCGTGGG CGGCCAGCTC GTGGCGAACC CGACGCTGGC CCAGCGCGCC GAGGCCGACC TCGACGTGGT GATGGCCGCC TCCCGCGACG CCATCGTGAT GGTGGAGGGC GGCGCGCAGG AGGTGTCCGA GGCGGTGATG ATCGAGGCGC TGCTGTTCGG GCAGGCCGCG GTCCAGCCGC TGCTCGACGC CCAGGACGCG CTCCGCGCGG CGACCGGCAA CAAGGCGCGC CGCGCCTTCG AGCCGCCCAA GAACGACGTC GAGCTGCGCG CCAAGGTGAA GGCCCTCACC TGGGAGAAGG TGAAGGAGGC CTACGGCCGC AACGAGAAGC ACGACCGGTA CGGCCGGCTC TCGGAGATCA AGAAGGAGCT CCTCCAGGCC CTCAAGGACG AGGCGGCCGG CGACGCGGCG AAGCTCGCGA CCATCGCCCT CCGCGAGAAG GAGATCAAGG GCTACTACGA GGACGTGAAG TACGACTACA TGCGCAAGAT GATCACGGAT GAGCGCCGCC GCATCGGCGG CCGCGGCATG GCCGACATCC GCAAGATCAC CTGCGAGGTG GGGCTGCTCC CGCGCGTTCA CGGCTCGTCG CTGTTCACCC GCGGCGAGAC GCAGGCGCTG GTGGCCACCA CGCTCGGCAC CGCCGAGGAC GAGCAGCGCG TCGAGATGCT CACCGGCATG GTCTTCAAGA AGTTCATGCT GCACTACAAC TTCCCGCCGT TCTCCGTCGG CGAGGTGAAG TTCCTGCGCA GCCCGGGCCG CCGCGAGATC GGCCACGGCG CGCTGGCCGA GCGCGCGCTC CGCGCGGTGA TGCCGCCCGA GGACCAGTTC CCCTACACGG TCCGCGTCGT CTCCGACATC ATGGAGTCGA ACGGCTCGTC GTCGATGGCG TCGGTGTGCG GCGGCTGCCT CTCGCTGATG GACGCCGGCG TGCCCATCAA GGCGCCGGTG GCCGGCATCG CCATGGGCCT CATCAAGGAG GGCGAGAAGA TCGCCATCCT CTCCGACATC CTCGGGGACG AGGATCACCT CGGCGACATG GACTTCAAGG TCTGCGGCAC CGCCGCGGGC ATCACCTCGA TCCAGATGGA CATCAAGATC GGCGGCGTGA CCCGCGACAT CCTCGAGCAG GCGCTCGCGC AGGCCGCCGA GGGCCGCAAG CACATCCTGG GCGAGATGGC GAAGGCGCTC TCCGCGCCGC GCGGCAGCAT CAGCGCCTAC GCGCCGCGCA TCACGACCAT CAAGATCCGG CCGGAGCGCA TCAAGGACAT CATCGGCCCC GGCGGCAAGA CCATCAAGGA CATCACCGCC CGCACCGGCA CCTCGATCAA CATCGAGGAC GACGGCTCGG TCTCCATCGC GTCCCCGAAC CAGGACAAGG TGGAGGAGGC GATCAAGATG ATCCGCGGCC TCACCCAGGA GGCGGAGGTC GGCCGCATCT ACCTCGGCAC GGTCCGCAAG ATCGCCGAGT TCGGCGCCTT CGTGGAGATC TTCCCGGGCA CCGACGGCCT CATCCACATC TCCGAGCTCT CCGACAAGCG CGTGAAGAGC GTCTCCGACG TCCTCTCCGA GGGCGAGGAG GTGATGGTGA AGGTCATCTC GGTGGATCGC TCCGGGAAGA TCCGCCTCTC GCGCAAGGAG GCCCTCGCCG ACAGCGCCAA GAAGTCCGAG GGCACCGAGC CGCCGAAGGG CGAGCCGGCC AAGTAG
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Protein sequence | MTPIQKTATV GGKDILLETG KVAKQAHGSV WVRLGDSIVL VTAVSAAEKK EGIDFFPLTV DYQEKLFAAG RVPGSFFRRE GRPTEKETLT SRLVDRSCRP LFAEGYSNET QVIATVISFD QENDTDVLAL TGASAALHIS DIPFGGPIAG VRVARVGGQL VANPTLAQRA EADLDVVMAA SRDAIVMVEG GAQEVSEAVM IEALLFGQAA VQPLLDAQDA LRAATGNKAR RAFEPPKNDV ELRAKVKALT WEKVKEAYGR NEKHDRYGRL SEIKKELLQA LKDEAAGDAA KLATIALREK EIKGYYEDVK YDYMRKMITD ERRRIGGRGM ADIRKITCEV GLLPRVHGSS LFTRGETQAL VATTLGTAED EQRVEMLTGM VFKKFMLHYN FPPFSVGEVK FLRSPGRREI GHGALAERAL RAVMPPEDQF PYTVRVVSDI MESNGSSSMA SVCGGCLSLM DAGVPIKAPV AGIAMGLIKE GEKIAILSDI LGDEDHLGDM DFKVCGTAAG ITSIQMDIKI GGVTRDILEQ ALAQAAEGRK HILGEMAKAL SAPRGSISAY APRITTIKIR PERIKDIIGP GGKTIKDITA RTGTSINIED DGSVSIASPN QDKVEEAIKM IRGLTQEAEV GRIYLGTVRK IAEFGAFVEI FPGTDGLIHI SELSDKRVKS VSDVLSEGEE VMVKVISVDR SGKIRLSRKE ALADSAKKSE GTEPPKGEPA K
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