| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1230 |
|---|
| Symbol | infB |
|---|
| ID | 7299096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 1380122 |
|---|
| End bp | 1382977 |
|---|
| Gene Length | 2856 bp |
|---|
| Protein Length | 951 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643594017 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_002491640 |
|---|
| Protein GI | 220916336 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0683246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGA AGCGGGTCCA CGAGCTCGGG AAGCAGCTGA AGGAGCAGGG CATCGAGCTC
TCCAACCAGG AGCTCGTCGA GAAGCTCCAT GCGCTGGGTT ATCTGGAAGT GAAGAGCCAC
TCCTCGTCCC TCGAGGACGA TCAGGCCCAC GCGGCCTACG AGAAGATCCT GGCCGAGCGG
AAGCCGAAGC CGGCGCCGGT GCGCCCGTCG GGCCCGGGCT TCGTGGTGCG CAAGCGCGCC
CACGTCGAGC CGCCCACCGT CACCGCGCCC GCGGCGCCGC CCCCGGCCGA GCCCGAGTAC
GCGGAGCCGC AGTACGCGGA GCCGCAGCAG GCGGAGCAGG CCTACGAGCC CGAGCCGCAG
GAGGCGCAGC CCGAGGCCGC GCCCGAGCCG GTCGCCGCCC CGGAGCAGCC CGCCGAGGCC
GCGCCGCTCG CCGCCCAGGC CGCGCCGTCG CCCGGCGCCG AGGCCGCGGC GCCCGCCGCG
CCGCAGGCGC AGCCCGCGCA GCCGGCGGCC CCGGTCGCCC CGCCCGCGCC CTCCGCGCAG
CCGTCCGCGC CGCAGCCCCC CGCGGCGCAG CCCCGGCCGC CGCAGCCGCC GATGCCGTCG
CGCCCGCCGC CCGCCGGCTA CCGCCCGGCG CCGCCGCCCG GCGCGCGCCC GCCCATGTCC
GCTGCTCCGG GGGCGCCCGC GCAGCCCGGC GCCGCAGGCC AGCCGCCGCG GCCGCCGGTG
GATCCGCGCA CGCTCCGCCC CACCTCCACG CAGGCCGTCG TCATCTCGCG GCCGCTCGTG
CCGGTGCGCC GCGTGACGCC GCCCACCTCC GCGCGCCAGC AGTTCCCGGT GGCCCCTGGC
CCCCGCGCGC TCGGCGAGGT CAGGGAGCTG AAGGTGGTCC CCGGCTCGCT CGGCCGCGAG
CGCGAGTTCA TCGACGTCTC GCGCGACAAG CGCCGCGGCC GCCAGCCCGG CCGGCCCATC
TCCGAGGAGC AGGCCAAGAG CCTCAGCGGC AAGGAGCTGC TCCAGGCCGC CATCAGCGAT
CGCGCCTACA TCCCGATCCG CGGCAAGAAG AAGAAGCCGA CCAAGAAGGG AGCCAAGACG
CAGATCACCG AGAAGGCCGA GCACAAGAAG GTCATCCGCA TCGAGGAGTC GATCTCGGTC
TCCGAGCTCT CCCAGGTGAT GGGCGTGAAG GCGTCCGACC TCATCCGCAA GCTGATGCAG
ATGGGGAAGA TGGTCACCAT CAACGCGCAG ATCGACGCCG ACACGGCGGC GATCCTGGCG
CTCGAGCACG GCTACACCGT CGAGAAGAAG GGCTTCGAGG TCGAGGAGTT CATCCCCGAG
GTCGAGGTGG ACGAGTCGAA GCTCGTCATC CGGCCGCCGG TGGTGACGGT GATGGGCCAC
GTGGACCACG GCAAGACGTC GCTGCTCGAC GCCATCCGCC AGGCCGACGT GGCCGCCGGC
GAGGCCGGCG GCATCACGCA GCACATCGGC GCCTACTCGG TGAACACGCC GCAGGGCCCC
ATCACGTTCC TCGACACCCC CGGCCACGAG GCCTTCACCG CGATGCGCCA GCGCGGCGCG
CAGGTGACCG ACCTGGTGGT GCTGGTGGTG GCCGCGGACG ACGGCGTGAT GCCGCAGACC
GTCGAGTCGA TCAAGGCGGC CAAGGCGGCC GGCGTCACCA TCCTGGTGGC CATCAACAAG
GTCGACAAGC CGCAGGCGGC GCCCGAGCGC GTCATGCAGC AGCTCACCGA GTACGAGCTG
GTCGCCGAGC AGTGGGGCGG CACGACCATC ATGCTGCCGG TATCGGCCCG CACCAAGCAG
GGCATCCCCG AGCTGCTCGA GTACATCGCG CTGCAGTCCG AGGTGCTCGA GCTCAAGGCG
AACCCGGACA AGCTCGCCGC CGGCCGCGTC ATCGAGGCCA AGCTGGAGAA GGGCCGCGGC
CCGGTCGCCA CCGTGCTGGT CGAGGAGGGC ACCCTCCGCG TCGGCGACGC GCTCGTCACC
GGCGTCCACT TCGGCCGCGT CCGCGCCATG ATGAACGAGC GCGGCGAGCA GGTGGACAAC
GTCGGCCCGG GCTATCCGGT CGAGGTGCTC GGCCTGTCCG GCGTGCCGGT CGCGGGCGAC
GAGTTCGACG TGGTCGAGGA CGAGAAGGCG GCCAAGGAGG TCGCCCAGCA CCGCGCCACC
AAGCAGCGCC AGAAGGAGCT CGGCGGCGTC AAGAAGGCCA CGCTCGAGGA CCTGTTCGCG
AAGGCCAAGA CCTCCGGCCA GAAGGTGCTC AACCTGGTGG TCAAGGCGGA CGTGCAGGGC
TCCTCGGAGG CCGTCAGCCA GGCGCTGGAG AAGGCGGCCA CCAAGAAGGT GGGCGTCAAG
ATCCTCGAGT CCGCCGTGGG CGCGATCACG AAGTCCGACG TGCTCACCGC GGCCGCCGGC
AACGCGGTGA TCGTGGGCTT CAACACCAAG CCCGAGAGCG AGATCGAGAA CATCGCCAGC
CAGCAGGGCG TGAAGATCCT GATGTTCGGC ATCATCTACG AGGCGGTGGA CCGGATCCGC
GAGGAGATGG CCGGCCTGCT CGAGCCGATC ATCAAGGAGA AGCCGCTGGG GAAGGCCGAG
GTCCGCCAGG TCTTCAACAT CCCGCGCGTG GGCCAGATCG CCGGCTCCGC GGTCACCGAG
GGCGTGGTGA AGCGCGCCGG CCACGTCCGC GTGGTCCGCG ACCGCAAGGT GATCTTCACC
GGGAAGATCG GCTCGCTGAA GCGGGTGAAG GACGACGTCC GCGAGGTCGC GCAGGGGTTC
GAGTGCGGCA TCGGCGTGGA CGGCTTCTCC GACGTGAAGC AGGGCGACAT CCTCGAGGTC
TACGAGCTCG AGGAGATCCG GCCGTCGCTC GACTAG
|
|---|
| Protein sequence | MSKKRVHELG KQLKEQGIEL SNQELVEKLH ALGYLEVKSH SSSLEDDQAH AAYEKILAER
KPKPAPVRPS GPGFVVRKRA HVEPPTVTAP AAPPPAEPEY AEPQYAEPQQ AEQAYEPEPQ
EAQPEAAPEP VAAPEQPAEA APLAAQAAPS PGAEAAAPAA PQAQPAQPAA PVAPPAPSAQ
PSAPQPPAAQ PRPPQPPMPS RPPPAGYRPA PPPGARPPMS AAPGAPAQPG AAGQPPRPPV
DPRTLRPTST QAVVISRPLV PVRRVTPPTS ARQQFPVAPG PRALGEVREL KVVPGSLGRE
REFIDVSRDK RRGRQPGRPI SEEQAKSLSG KELLQAAISD RAYIPIRGKK KKPTKKGAKT
QITEKAEHKK VIRIEESISV SELSQVMGVK ASDLIRKLMQ MGKMVTINAQ IDADTAAILA
LEHGYTVEKK GFEVEEFIPE VEVDESKLVI RPPVVTVMGH VDHGKTSLLD AIRQADVAAG
EAGGITQHIG AYSVNTPQGP ITFLDTPGHE AFTAMRQRGA QVTDLVVLVV AADDGVMPQT
VESIKAAKAA GVTILVAINK VDKPQAAPER VMQQLTEYEL VAEQWGGTTI MLPVSARTKQ
GIPELLEYIA LQSEVLELKA NPDKLAAGRV IEAKLEKGRG PVATVLVEEG TLRVGDALVT
GVHFGRVRAM MNERGEQVDN VGPGYPVEVL GLSGVPVAGD EFDVVEDEKA AKEVAQHRAT
KQRQKELGGV KKATLEDLFA KAKTSGQKVL NLVVKADVQG SSEAVSQALE KAATKKVGVK
ILESAVGAIT KSDVLTAAAG NAVIVGFNTK PESEIENIAS QQGVKILMFG IIYEAVDRIR
EEMAGLLEPI IKEKPLGKAE VRQVFNIPRV GQIAGSAVTE GVVKRAGHVR VVRDRKVIFT
GKIGSLKRVK DDVREVAQGF ECGIGVDGFS DVKQGDILEV YELEEIRPSL D
|
|---|
| |