| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1020 |
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| Symbol | |
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| ID | 7297066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 1143855 |
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| End bp | 1144796 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643593813 |
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| Product | DNA polymerase LigD, polymerase domain protein |
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| Protein accession | YP_002491437 |
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| Protein GI | 220916133 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00719502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCGCG CGCAGCAGGG CGTGGAGGTC GAGGTGGAGG GGCGGCGGAT CCAGCTGCGC
AACCTCGACA AGGTCTTCTA CCCCGAGGCC GGCTTCACCA AGGGTGAGGT GGTGGACTAC
TACCGCCGCG TCGCCCCCGT GCTCCTGCCG CACCTGCGGG ATCGGCCGCT CACGCTGAAG
CGCTACCCGG AGGGCGTGGA CGGGCCGCAC TTCTACGAGA AGCGCTGTCC GCGCCACCGC
CCGGACTGGT TCCGGACCGA GGCGATCTGG AGCGAGGGCA ACCAGGACTA CATCGACTAC
TGCGTGGTGG ACGACCTGTC CTCGCTGGTG TGGCTCGCCA GCATCGCCGA CCTGGAGCTC
CACCCCTCGC TGTCGCGGGT GGACGACGTG GAGCGGCCCA CCGCGCTCGT GTTCGACCTC
GACCCGGGCC CGCCCGCCGA GCTGCTCGCC TGCTGCGAGG TGGCGCTGCT GCTGCGGCGG
CTGCTCGCCG CGCTGGGCCT GGAGGCGTTC CCGAAGAGCT CCGGCTCGAA GGGCATGCAG
CTGTACGTGC CGCTCTCCGG CGCCACCTAC GCGGACACGA AGCCGTTCGC GCACGCCGTC
GCCCGCGTGC TGGAGCGCCG CCACCCGCAG CTCGTGGTCG AGCGCATGGC GAAGGCGCTC
CGCGGCGGCA AGGTGCTGGT GGACTGGAGC CAGAACGACC CGCACAAGAC CACCGTCTGC
GTCTACTCGC TCCGGGCGCG GCCGCGCCCC ACCGTCTCCA CCCCGCTCCG CTGGGCAGAG
GTGGAGAAGG CCGTGCGGAC CCGCGACGCG GGCGGGCTGG TGTTCGAGGC AGGCGCGGTG
CTCCGGCGGG TCGAGCGCGT GGGGGACCTG TTCGCCCCGG TGCTGACGCT GCGCCAGCGC
CTGCCCGCCC CGGCGGAGCT CGAGCGGGCG GCCGGCGCGT GA
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| Protein sequence | MARAQQGVEV EVEGRRIQLR NLDKVFYPEA GFTKGEVVDY YRRVAPVLLP HLRDRPLTLK
RYPEGVDGPH FYEKRCPRHR PDWFRTEAIW SEGNQDYIDY CVVDDLSSLV WLASIADLEL
HPSLSRVDDV ERPTALVFDL DPGPPAELLA CCEVALLLRR LLAALGLEAF PKSSGSKGMQ
LYVPLSGATY ADTKPFAHAV ARVLERRHPQ LVVERMAKAL RGGKVLVDWS QNDPHKTTVC
VYSLRARPRP TVSTPLRWAE VEKAVRTRDA GGLVFEAGAV LRRVERVGDL FAPVLTLRQR
LPAPAELERA AGA
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